Natronomonas salina: HWV07_07170
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Entry
HWV07_07170 CDS
T07280
Name
(GenBank) ribonuclease J
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
nsal
Natronomonas salina
Pathway
nsal03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nsal00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HWV07_07170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nsal03019
]
HWV07_07170
Messenger RNA biogenesis [BR:
nsal03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
HWV07_07170
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Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
Lactamase_B_2
Lactamase_B
RMMBL
Motif
Other DBs
NCBI-ProteinID:
QLD88826
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Position
complement(1333747..1335087)
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AA seq
446 aa
AA seq
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MEIEIATIGGYEEVGRQMTAVRAGEDIVIFDMGLNLSKVLIHDDVRTERMHSLDLIDMGA
IPDDRVMSDLKGDVQAIVPTHGHLDHIGAISKLAHRYDAPIVASPFTIELVREEINDENK
FDVQNDLVKMDPGGTMPIGDDCELEFVNVTHSIIDAINPVLHTPEGAVVYGLDKRMDHTP
VLGDPIDMERFREIGNEGVLCYIEDCTNANKKGRTPSESVAREHLKDVMYSLEDYDGGIV
ATTFSSHIARVSSLVEFAKDIGRKPVLLGRSMEQYSGTAERMGAVDYPDDLGMYGHRNSV
DKTFERIMNEGKEKYLPVVTGHQGEPRAMLTRMGRGETPYELDEGDKVIFSARVIPEPTN
EGQRYQAETLLRMQGARIYDDIHVSGHLCQEGHYEMLQALQPENIIPAHQNMKGFSGYVD
LAKNQGYNVGDDIHITSNGNTIQLVE
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atggaaatcgaaatcgcaacaatcggcggctacgaggaggtcggccggcagatgactgcc
gtccgggcgggcgaagacatcgtcatcttcgacatggggctgaacctgtcgaaggtcctc
atccacgacgacgtacgcacggaacggatgcacagcctggacctcatcgacatgggcgcg
atccccgacgaccgcgtcatgtcggacctcaagggcgacgtgcaggcgatcgtgccgacg
cacggccacctcgaccacatcggcgccatctcgaagctcgcccaccgctacgacgccccc
atcgtcgcctcgccgttcaccatcgaactcgtccgcgaggagatcaacgacgagaacaag
ttcgacgtccagaacgacctggtgaagatggaccccggcggcacgatgccgatcggcgac
gactgcgaactggagttcgtcaacgtcacccactccatcatcgacgccatcaaccccgtc
ctccacaccccggagggcgccgttgtgtacggcctcgacaagcggatggaccacacgccc
gtcctgggcgaccccatcgacatggagcgcttccgcgagatcggcaacgagggcgtcctc
tgttacatcgaggactgcacgaacgccaacaagaagggccggacgccctccgagtccgtc
gcaagggagcacctcaaggacgtgatgtactccctggaggactacgacggcggcatcgta
gccaccaccttctccagtcacatcgctcgggtctcctcgctcgtcgaattcgcgaaggac
atcggccggaagccggtgctgctcgggcgctcgatggagcagtacagcggcaccgccgag
cggatgggcgccgtcgactaccccgacgacctcgggatgtacggccaccgcaactccgtc
gacaagaccttcgagcgcatcatgaacgagggcaaagagaagtacctgcccgtcgtcacg
ggccaccagggcgagccgcgcgcgatgctcacccggatgggacgcggcgagacgccgtac
gaactggacgagggcgacaaggtcatcttcagtgcgcgggtcatcccggagccgaccaac
gagggccagcgctaccaggccgagaccctcctccgcatgcagggcgcccgcatctacgac
gacatccacgtctccggccacctctgtcaggagggccactacgagatgctgcaggccctc
cagcccgagaacatcatcccggcccaccagaacatgaagggcttctcggggtacgtcgac
ctcgcgaagaaccaggggtacaacgtcggcgacgacatccacatcacctcgaacggcaac
acgatccagctcgtcgaataa
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