Natronomonas salina: HWV07_07275
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Entry
HWV07_07275 CDS
T07280
Name
(GenBank) CDC48 family AAA ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
nsal
Natronomonas salina
Pathway
nsal04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
nsal00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
HWV07_07275
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nsal03019
]
HWV07_07275
03009 Ribosome biogenesis [BR:
nsal03009
]
HWV07_07275
04131 Membrane trafficking [BR:
nsal04131
]
HWV07_07275
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nsal04147
]
HWV07_07275
Messenger RNA biogenesis [BR:
nsal03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
HWV07_07275
Ribosome biogenesis [BR:
nsal03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
HWV07_07275
Membrane trafficking [BR:
nsal04131
]
SNARE
SNARE associated proteins
Others
HWV07_07275
Autophagy
Aggrephagy
Other aggrephagy associated proteins
HWV07_07275
Exosome [BR:
nsal04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
HWV07_07275
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
CDC48_N
AAA_lid_3
CDC48_2
AAA_16
RuvB_N
AAA_5
AAA_22
TIP49
AAA_2
AAA_33
AAA_14
nSTAND3
NPHP3_N
RNA_helicase
IstB_IS21
AAA_28
Mg_chelatase
AAA_7
AAA_17
AAA_18
ABC_tran
DUF815
AAA_3
Sigma54_activat
ATPase
AAA_24
NB-ARC
Parvo_NS1
AAA_lid_PRS2_C
AAA_30
TsaE
AAA_11
SLFN-g3_helicase
PhoH
NACHT
IPT
Vps4_C
Motif
Other DBs
NCBI-ProteinID:
QLD88841
LinkDB
All DBs
Position
complement(1355872..1358094)
Genome browser
AA seq
740 aa
AA seq
DB search
MNEVQLEVAKAYPNDSGRGIARLDPDTLLHLKLSPGDIIEIEGADTTAAKVWRADRQDWN
TDTVRIDGFTRQNADVGIGERVTIRKAEATKADKLVLAPPEEASVQFGSDAAGMVKRQIL
KRPVVERDIVPVMSSTNHPFMRSPGQAIPLIAVETDPEGVCLITEDTEVELREEPISGFE
KTGGGITYEDIGGLQNEIQRVREMVELPMKHPQIFKKLGIEPPQGVLLHGPPGTGKTLLA
KAVANETSASFFSIAGPEIISKYYGESEQQLREIFEDASEESPSIIFIDELDSIAPKRED
VTGEVERRVVAQLLTMMDGLESRGQVIVIAATNRVDSVDPALRRPGRFDREIEIGVPDET
GRKEILQIHTRGMPLADDVSLDGMADETHGFVGADIESLTKEAAMKALRRYLPEIDLDEE
DIPPSLIDRMIIKRDDFRGALNEVDPSAMREVLVELPKVSWDDVGGLDDAKGQVQESVEW
PLNKPEKFDRMGIEPPAGVLLYGPPGTGKTLMAKAVANETNANFISVRGPQLLSKWVGES
EKAIRQTFRKARQVSPTVIFFDELDSLAPGRGGETGSNVSERVVNQLLTELDGLEEMDNV
MVIAATNRPDMIDPALIRSGRFDRLVMIGEPDVGGRQQILQIHTDDTPLAPDVSLKELAE
ITDGYVGSDLESIAREAAIEALREDDDADEVEMRHFRQALESVRPTITDDIREYYDQVED
QFRGGSPDGRRQSGGRIGFQ
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaggtccaactggaggtggcgaaggcctaccccaacgactcgggacggggcatc
gctcgcctcgacccggacacgctgctgcacctgaagctgtcgccgggcgacatcatcgag
atcgagggcgcggacacgacggcggcgaaggtgtggcgggcggaccggcaggactggaac
accgacacggtccgcatcgacgggttcacccggcagaacgccgacgtcggcatcggcgag
cgcgtgaccatccggaaggcagaggcgacgaaggccgacaagctcgtgctggcgccgccc
gaggaggcctccgtgcagttcggctccgacgccgccggcatggtcaagcggcagatcctc
aagcggccggtcgtcgagcgcgacatcgtccccgtgatgagctcgacgaaccaccccttc
atgcggtcgccgggccaggcgatcccgctgatcgccgtcgagaccgaccccgagggcgtc
tgtctcatcaccgaggacaccgaggtcgaactccgcgaggagcccatctcgggcttcgag
aagaccggcggcggcatcacctacgaggacatcggcggcctgcagaacgagatccagcgc
gtccgcgagatggtcgagctgccgatgaagcacccccagatcttcaagaagctcggcatc
gagccgccccagggggtgctgctccacggcccgcccggcaccgggaagacgctgctggcg
aaggccgtcgccaacgagacgtcggcgagcttcttctccatcgccggccccgagatcatc
tcgaagtactacggcgagtccgaacagcaactccgggagatattcgaggacgccagcgag
gagtcgccgtcgatcatcttcatcgacgagttggactccatcgcgccgaagcgcgaggac
gtcaccggcgaggtcgaacgccgcgtcgtcgcccagctgctgacgatgatggacggcctc
gagtcccgcggccaggtcatcgtcatcgccgcgacgaaccgcgtcgacagcgtcgacccg
gcgctccgccgcccgggccgcttcgaccgcgagatcgagatcggcgtccccgacgagacc
ggccgcaaggagatcctgcagatccacacccgcgggatgccgctggccgacgacgtctcc
ctggacgggatggccgacgagacccacggcttcgtcggcgccgacatcgagagcctcacc
aaggaggccgcgatgaaggcgctgcgacggtacctccccgagatcgacctcgacgaggag
gacatcccgccgagcctcatcgaccggatgatcatcaagcgcgacgacttccgcggcgcg
ctcaacgaggtcgacccctcggcgatgcgggaggtcctcgtagagctgccgaaggtgtcg
tgggacgacgtcggcggcctcgacgacgcgaagggccaggtccaggagtccgtcgagtgg
ccgctcaacaaacccgagaagttcgaccggatgggtatcgagccgccggcgggcgtgctg
ttgtacggcccgcccggcaccgggaagaccctgatggcgaaggccgtcgccaacgagacg
aacgccaacttcatctcggtgcgcggcccgcagctgctctcgaagtgggtcggcgagtcg
gagaaggccatccgccagaccttccggaaggcccgacaggtctcgccgacggtcatcttc
ttcgacgagctcgactcgctggcgccgggccgcggcggcgagaccggctcgaacgtctcc
gagcgcgtcgtcaaccagctcctcacggagctcgacggcctcgaggagatggacaacgtc
atggtcatcgccgcgacgaaccgcccggacatgatcgacccggcgctcatccgtagcggc
cggttcgaccggctggtcatgatcggcgaaccggacgtcggcggtcgccagcagatcctc
cagatccacaccgacgacacgccgctggcgccggacgtcagcctcaaggagctcgccgaa
atcaccgacggctacgtcggctccgacctcgagtccatcgcccgcgaggccgccatcgag
gcgctccgcgaggacgacgacgccgacgaggtggagatgcggcacttccggcaggccctc
gagtcggtgcggccgaccatcaccgacgacatccgcgagtactacgaccaggtggaagac
cagttccgcggcggcagccccgacggccgacgccagagcggcggccggatcgggttccag
taa
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