Natronomonas salina: HWV07_16235
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Entry
HWV07_16235 CDS
T07280
Name
(GenBank) transcription initiation factor IIB family protein
KO
K03124
transcription initiation factor TFIIB
Organism
nsal
Natronomonas salina
Pathway
nsal03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
nsal00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
HWV07_16235
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nsal03021
]
HWV07_16235
Transcription machinery [BR:
nsal03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
HWV07_16235
Prokaryotic type
Archaeal type
TFB
HWV07_16235
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
HTH_3
HTH_Crp_2
DZR_2
DZR
RB_B
Motif
Other DBs
NCBI-ProteinID:
QLD90499
LinkDB
All DBs
Position
3144379..3145248
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AA seq
289 aa
AA seq
DB search
MSTSTRRACPECEGRLRSTGTETVCSECGLVVGEDALDRGPEWRSFADDDGNPERCGAPL
TRSRHDRGLSTEIGHSTRLKGRKRRRVARMRREHKRARIGSKRDRNQVYGFTEIRRVTGQ
LELPDALQERACVLFESAQDENLLQGRSIEGFAAAAVYAVCRTASVSRTLGEIVGVAAAD
EAELKVAYDALNRDLGLPTGPIDPAEYLARFASKLDVPSALERRARELATDASDAGITTG
RNPSGVAAACLYTVARESSYDLTQEEAADVAGVSTVTIRNTYQDLRDSA
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgagcacgagcacgcgacgggcctgccccgagtgcgaggggcggctgcggagcaccggc
acggagacggtctgcagcgagtgcggtctggtggtcggcgaggacgccctcgaccgaggg
ccggagtggcggtcgttcgcggacgacgacggcaacccggagcgctgcggggcgccgctc
acccgatcgcgacacgaccgcggactgtcgaccgagatcggccactccacgcgcctgaag
ggacggaagcggcgacgcgtggcccgcatgcggcgggagcacaagcgggcgcggatcggg
tcgaagcgcgaccgcaaccaggtctacgggttcacggagatccggcgcgtgacgggccag
ctcgaactccccgacgcgctccaggaacgggcctgcgtcctcttcgagtccgcccaggac
gagaacctcctgcagggccgttccatcgaggggttcgccgcggcggcggtgtacgcggtc
tgccggaccgcctccgtctcgcggacgctgggggagatcgtcggcgtcgccgccgccgac
gaggccgaactgaaggtcgcctacgacgcgctgaaccgcgacctcggattgccgaccggc
cccatcgaccccgcggagtacctcgcccgcttcgcctcgaagctcgacgtcccgagcgcg
ctggagcggcgggcccgcgagctcgcgacggatgccagtgacgccggcatcacgaccggc
cggaatcccagcggtgtcgccgccgcctgcctctacacggtcgcccgcgagtcgagctac
gacctcacgcaggaggaggccgccgacgtggccggcgtctcgacggtcacgatcaggaac
acctaccaggacctgcgggactcggcctga
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integrated database retrieval system
