Natronomonas salina: HWV07_16295
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Entry
HWV07_16295 CDS
T07280
Name
(GenBank) DEAD/DEAH box helicase
KO
K03725
putative ATP-dependent RNA helicase [EC:5.6.2.-]
Organism
nsal
Natronomonas salina
Brite
KEGG Orthology (KO) [BR:
nsal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nsal03019
]
HWV07_16295
Messenger RNA biogenesis [BR:
nsal03019
]
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Others
HWV07_16295
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-ProteinID:
QLD90509
LinkDB
All DBs
Position
complement(3155005..3157032)
Genome browser
AA seq
675 aa
AA seq
DB search
MSKQVADVDTLFLHEAGDDYTVVVRRDGERLLRGRLTTKQTSAGPRPGRFRVKDGDDEVP
RRPEQFVEMLRRSKRIRISEQTSRRGREELEAMLDGYQLDAKQVRTCRICANKGRYSPLT
AETAIKNDDEHICPDCAKRELEREANYRGLQSGARDRLEELLLEVGDLERVANLLSGQLD
PDLTKFDEISATTDDIELVSTSELDVHRDLKESVQKFDTLLPVQSLAVDNGLLEGRDQLV
VSATATGKTLVGELAGVDRALKGEGKLLFLVPLVALANQKHEDFQEDYGDLLDVTLRVGA
SRIRDNGNHFDPGADVIVGTYEGIDHALRTGKDLGDIGTVVIDEVHNLGEEERGHRLDGL
ISRLKHYCETNDDDTQWVYLSATVGNASELAGQLDAQLIEFEERPVPIERHVTFAGGSEK
IDVENKLVRRAFDAKSSKGYRGQTIVFTNSRRRCHEISRRLDYDSAPYHAGLDYGQRKRV
ERQFGDQDLAAVVTTAALAAGVDFPASQVVFDSLAMGIEWLSVQEFEQMLGRAGRPDYHD
EGTVYLLVEPDCTYHNSMEMSEDEVAFKLLKGEMEPVITPYDEDAAVEETLANVTVAGKR
AKVLNDRMVGEVPTKHAVGKLLEYGFIDGFEPTPLGRAVTEYFLEPDEAFAMLDAIRKGA
DPYEIVAEIELRDEY
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
gtgtcaaagcaggtcgccgacgtcgacacgctgttcctccacgaggccggcgacgactac
acggtcgtcgtccgccgcgacggcgagcgactgctccgcggtcgactgacgacgaagcag
acgagcgccggcccccggcccggccggttccgcgtgaaggacggcgacgacgaggtgccg
cgccgccccgagcagttcgtcgagatgctgcgccgctcgaagcgcatccgcatctccgag
cagacctcccggcggggccgggaggaactggaggcgatgctggacggctaccagctcgac
gccaagcaggtccggacctgccggatctgcgcgaacaagggccggtactcgccgctgacc
gccgagacggcgatcaagaacgacgacgagcacatctgcccggactgcgcgaagcgcgaa
ctcgagcgggaggcgaactaccgcggcttgcagtcgggcgcccgagaccgcctcgaggag
ctgctgctggaggtcggcgacctcgagcgggtcgcgaacctcctgtcgggccagctcgac
cccgacctcacgaagttcgacgagatcagcgccaccaccgacgacatcgagctggtctcg
acgagcgagctcgacgtccaccgcgacctcaaggagtccgtccagaagttcgacaccctc
ctgccggtccagagcctcgccgtcgacaacgggctgctggagggccgcgaccagctggtc
gtctcggcgacggcgaccgggaagacgctcgtcggcgagctggcgggcgtcgaccgcgcg
ctgaagggcgaggggaagctgctcttcctcgtcccgctggtcgccctcgccaaccagaag
cacgaggacttccaggaggactacggcgacctgctcgacgtcaccctccgggtcggcgcc
tcgcgcatccgcgacaacggcaaccacttcgaccccggcgccgacgtcatcgtcggcacc
tacgagggcatcgaccacgccctgcggaccggcaaggacctcggcgacatcgggacggtc
gtcatcgacgaggtgcacaacctcggcgaggaggagcggggccaccgcctcgacggcctc
atctcgcggctgaagcactactgcgagacgaacgacgacgacacccagtgggtgtacctc
tcggcgaccgtcggcaacgccagcgaactggccggccagctcgacgcccagctcatcgag
ttcgaggagcggccggtccccatcgagcgccacgtcaccttcgccggcggctccgagaag
atcgacgtcgagaacaagctcgtcaggcgggccttcgacgcgaagtcctcgaaggggtac
cgcggccagaccatcgtcttcacgaactcccgacggcgctgccacgagatctcgcggcgc
ctggactacgactccgcgccgtaccacgccggcctcgactacggccagcgcaagcgcgtc
gagcggcagttcggcgaccaggacctcgcggccgtcgtcaccaccgccgccctcgcggcc
ggcgtcgacttcccggcctcgcaggtcgtcttcgactcgctggcgatgggcatcgagtgg
ctctccgtccaggagttcgagcagatgctcggccgcgcgggccgcccggactaccacgac
gaggggaccgtctacctgctcgtggagcccgactgcacctaccacaactccatggagatg
agcgaggacgaggtggcgttcaagctcctgaagggcgagatggagccggtcatcacgccc
tacgacgaggacgccgccgtcgaggagacgctggcgaacgtcaccgtcgcgggcaagcgc
gcgaaggtgctcaacgaccgcatggtcggggaggtgccgacgaagcacgccgtcggcaag
ctcttggagtacgggttcatcgacggcttcgagccgacgccgctcggtcgagcggtcacc
gagtacttcctcgaacccgacgaggcgttcgcgatgctcgacgccatccgcaagggcgcc
gacccctacgagatcgtcgcggagatcgaactccgcgacgagtactga
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