Neisseria sicca: J7445_01060
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Entry
J7445_01060 CDS
T07263
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
nsc
Neisseria sicca
Pathway
nsc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nsc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
J7445_01060
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nsc03019
]
J7445_01060
Enzymes [BR:
nsc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
J7445_01060
Messenger RNA biogenesis [BR:
nsc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
J7445_01060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
DNA_alkylation
UvrD-helicase
AAA_22
Helicase_C_2
Motif
Other DBs
NCBI-ProteinID:
QTM23398
LinkDB
All DBs
Position
complement(230232..231647)
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AA seq
471 aa
AA seq
DB search
MNPFASLGLGSELVSALTEQGYENPTPIQAAAIPKALAGHDLLAAAQTGTGKTAAFMLPS
LERLKRYATASTSPAMHPVRMLVLTPTRELADQIDQNVQGYIKNLPLRHTVLFGGVNMDK
QTADLRAGCEIVVATVGRLLDHVKQKNINLNKVEIVVLDEADRMLDMGFIDDIRKIMQML
PKQRQTLLFSATFAPPIRKLAKDFMNAPEIVEVAAQNTTSANVEQHIIAVDALKKRNLLE
RLIVDLQMNQVIVFCKTKQSVDQVTRDLVRRNLAAQSIHGDKSQQSRLETLNAFKEGSLR
VLVATDVAARGLDIAELPFVINYELPTQPEDYVHRIGRTGRAGADGVAISLMDKTEQKMF
EAIKELTGNDLAVERIEGFEPNWWGTDADGDAATDTQPAPTRSRSSDRNRSERNNRSERN
ERNERNDRGDKFPKADKADPGAACGTIAGRSRRSRRERQPCALLQPNYGTK
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgaatccattcgcctcactcgggctgggcagcgaactcgtttccgcgctgaccgaacaa
ggttacgaaaacccgacgcccatccaagccgccgccatccccaaagcactcgccggtcat
gatttactcgccgccgcccaaaccggcacaggcaaaaccgccgcctttatgctgcccagt
ctggaacgcctcaaacgctacgccaccgccagtacctcgcccgcgatgcaccccgtgcgt
atgctcgtattgaccccgacgcgcgaactcgccgaccaaatcgaccaaaacgtgcagggc
tatatcaaaaatctgccgctgcgccacaccgtcctcttcggcggcgtcaacatggacaaa
caaaccgccgacctgcgcgccggctgcgaaatcgtcgtcgccaccgtcggcaggctgctt
gaccacgtcaaacaaaaaaacatcaacctcaacaaagtcgaaatcgtcgttctcgacgaa
gccgaccgtatgttggatatgggcttcatcgacgacatccgcaaaatcatgcagatgctg
cccaaacaacgccaaaccctgctcttttccgcaacgtttgccccgcccatccgcaaactc
gccaaagacttcatgaacgcgcccgaaatcgtcgaagttgccgcgcaaaacaccaccagc
gccaatgtcgagcaacacatcatcgccgttgacgcgcttaaaaaacgcaacctcctagag
cggctgattgtcgatttgcagatgaaccaagtcatcgtgttctgcaaaaccaaacaaagc
gtcgaccaagttacccgcgacctcgtgcgccgaaacctcgccgcccaatccatccacggc
gacaaatcccagcaaagccgcctcgaaaccctcaacgccttcaaagaaggcagcctgcgc
gtcctcgtcgccaccgacgtcgccgcacgcggactggacatcgccgagctgccctttgtc
atcaactacgaattgccaacccagcccgaagactacgtccaccgcatcggacgcaccggt
agggcaggcgcggacggcgttgccatttccctgatggacaaaaccgaacaaaaaatgttt
gaagccatcaaagagctgaccggtaacgacttggcagtcgaacgcatcgaaggcttcgag
ccgaactggtggggaaccgacgccgacggcgatgccgccacagacacccaacccgcaccg
acccgcagccgcagcagcgacagaaaccgctccgaacggaacaaccgcagcgaacgcaat
gaacgtaacgagcgtaacgaccgcggcgacaaattccccaaagcggacaaagccgatccc
ggcgccgcctgtggcaccatcgccggacgaagccgccgcagccgcagggaacgccaaccc
tgcgccctgctgcaacccaattacggcacgaaataa
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