Neisseria sicca: J7445_01160
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Entry
J7445_01160 CDS
T07263
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
nsc
Neisseria sicca
Pathway
nsc03030
DNA replication
nsc03430
Mismatch repair
nsc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nsc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
J7445_01160 (dnaE)
03430 Mismatch repair
J7445_01160 (dnaE)
03440 Homologous recombination
J7445_01160 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nsc03032
]
J7445_01160 (dnaE)
03400 DNA repair and recombination proteins [BR:
nsc03400
]
J7445_01160 (dnaE)
Enzymes [BR:
nsc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
J7445_01160 (dnaE)
DNA replication proteins [BR:
nsc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
J7445_01160 (dnaE)
DNA repair and recombination proteins [BR:
nsc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
J7445_01160 (dnaE)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
HROB
Motif
Other DBs
NCBI-ProteinID:
QTM23416
LinkDB
All DBs
Position
complement(247679..251113)
Genome browser
AA seq
1144 aa
AA seq
DB search
MTEPTYIPLRLHTEFSITDGMVRIKKLIAKAQEYGLPALGISDLMNEFGLVKFYKACRSA
GIKPVGAADVWIGNPNAPDKPFRAMLIIRNDAGYLRLSELLTAAYVGKDRNVHHAELNPE
WLENGDNSGLICLSGAHYGEVGVNLLNGNEDAARAAALKYAAWFPDAFYLELQRLPERPE
WEACVSGSVKLAEELGLPVVATHPTQFMSRDDFNAHEARVCIAGGWVLTDKKRPRDFTPS
QFFIPPETMLERFADLPEALENTVEIAKRCNIHITLGKNFLPLFPTPDGLSLDDYLVKLS
NEGLQERMVQLYPDEAERAAKMPEYQERLDFELNIIIQMKFPGYFLIVQDFINWAKTHGC
PVGPGRGSGAGSLVAYSLKITDLDPLKYALLFERFLNPERVSMPDFDVDFCQSNRGRVIE
YVRDKYGAQAVSQIVTFGTMSSKAVIRDVGRVLELPFTLCDKLSKLIPLEANKPLGLDDA
MKAEPQIQELIEAEEADELITLAKKLEDLTRGLGMHAGGVLIAPGKISDYSPVYQADESA
SPVSMYDKGDVEDVGLVKFDFLGLRNLTIIEMAQNNIKNTTGDIVDVGKIPLDDQAAYKI
FRDANTTAVFQFESTGMKKMLKTAHTTKFEELIAFVSLYRPGPMDNIPDFVARMKGQEFQ
YIHPLLEGILAPTYGIMVYQEQVMQAAQIIGGYSLGGADLLRRAMGKKKPEEMVKHREIF
AEGAAKQGISREKSDEIFNYMEKFAGYGFNKSHAAAYALISYQTAWLKAHYPAEFMAATM
SSELDNTDQLKHFYDDCRANGIEFLPPDINESDYRFTPYPNMKIRYALGAIKGTGEAAVE
SIIAARQSGGKFTGLLDFCERVGKEHMNRRTLEALIRGGAFDSIEPNRAMLLANIDLAMN
NADQKAANANQGGLFDMMEDAIEPVQLIDAPMWSESEKLAEEKTVIGFYLSGHPFGPYAQ
EVRQIAPTKLGRLKPQDSVRLAGFVTAVRTMMGKRGKIAFVSLEDLSGQIEIMVSGQTLE
NCADYLKSDQVLIIESKVSRDDYGGGDGLRIMANQVMTLQMARERYARSLSLALAPGHDI
ARLAAILTAHRLPDTSHIPLQLSYSNDKASGKFQVPPKWMVTPSSALFDELEKLLGSRAV
RVNW
NT seq
3435 nt
NT seq
+upstream
nt +downstream
nt
atgaccgagccgacctacatcccgctgcgcctgcataccgagttttcgattaccgacggt
atggtgcggattaaaaaactgattgccaaagcgcaggaatacggtttgcctgctttgggc
atcagcgatttgatgaacgaattcggtttggtgaaattctataaagcctgccgcagcgcg
gggattaagcctgtcggggcggcggacgtgtggataggcaatccgaatgcgcccgacaag
ccgttccgcgccatgctgattatccgcaacgatgcgggctatctgcgcctgagcgagctt
ttgacggcggcttatgtcggcaaagaccgtaatgtccatcatgcggaactcaatcccgaa
tggctggaaaacggcgacaacagcggcttgatttgtttgagcggcgcgcattacggcgaa
gtgggtgtgaatctcttgaacggcaatgaagacgcggcgcgtgcggcggcgttgaagtat
gcggcgtggtttcccgatgcgttttatctggagctgcaacgcctgcccgaacgccccgaa
tgggaggcttgcgtttcgggcagcgtgaagctggcggaggaattgggtttgccggtggtg
gcgacgcatccgacgcagtttatgagccgcgacgatttcaacgcgcacgaggcgcgggtg
tgcatcgcgggcggctgggtgctgacggacaagaaacgtccgcgcgattttacgccgagc
cagtttttcattccgccggaaacgatgctggaacgtttcgccgatttgcccgaagccttg
gaaaacacggtagaaattgccaaacgctgcaatatccatatcacgctgggcaaaaacttc
ctgcccctgttcccgacgcccgacggcctgtcgctcgacgattatctggtgaaactgtcc
aacgagggtttgcaggaacgcatggttcagctttatcccgacgaggcggagcgggcggcg
aaaatgccggaatatcaggaacggctggattttgagctgaacatcatcatccagatgaaa
ttccccggctatttccttatcgtacaagactttatcaactgggcgaaaacgcacggctgt
ccggtagggccgggacgcggttcgggcgcgggttcgctggtggcgtattctctgaagatt
accgacctcgacccgctgaaatacgcgctgctgttcgaacgtttcctaaaccccgaacgc
gtttccatgcccgacttcgacgtggacttttgccaaagcaaccgcggtcgcgtgattgag
tatgtgcgcgataaatacggcgctcaggcggtgagccagattgtgaccttcggcacgatg
tcgtccaaagcggtgattcgcgacgtggggcgcgtgctggagctgccgtttaccctgtgc
gacaaactgtctaagctgattccgctggaagccaacaaacctctgggtttggacgatgca
atgaaggcggagccgcaaattcaggaattgattgaagcggaagaagcggacgaactgatt
acgctggcgaaaaagctggaagacctgacgcgcggtctgggtatgcacgcgggcggcgtg
ttgattgcgccgggcaagatttccgattacagccccgtgtatcaggcggacgaatccgcc
tcgcccgtatccatgtacgacaagggcgacgtagaagacgtgggcttggtgaagttcgac
tttttgggcctgcgcaacctgaccattatcgaaatggcgcagaacaacatcaaaaacacc
accggcgatattgtcgatgtcggcaaaatcccgctcgacgaccaggccgcctacaaaatc
ttccgcgacgcgaacaccaccgccgtcttccagttcgagtcgaccggtatgaaaaaaatg
ctgaaaacggcgcacacgaccaagtttgaagaacttatcgccttcgtgtcgctctaccgc
cccggcccgatggacaacattcccgacttcgttgcgcgcatgaaaggtcaggaattccaa
tacatccacccgctgctcgaaggcatcctcgcgccaacctacgggattatggtgtatcag
gaacaagtgatgcaggcggcgcagattatcggcggctactcgctcggcggcgcggacttg
ctgcgccgcgccatgggtaagaaaaagcccgaagaaatggtgaaacaccgcgaaatcttc
gccgaaggtgcagcaaaacaaggcatttcgcgagaaaaatccgacgaaatcttcaactac
atggaaaaattcgccggctacggtttcaacaaatcccacgccgccgcctacgccctgatt
tcctaccagaccgcatggctcaaagcccattaccccgccgaatttatggcggcaaccatg
tcgtctgaattggacaataccgaccagctcaagcatttctacgacgactgccgcgccaac
ggcatcgagttcctgccgcccgacatcaacgaatccgactaccgtttcacgccgtatccg
aacatgaaaatccgctacgcactcggcgcgattaaaggcacgggcgaagccgccgtcgaa
tccatcatcgccgcgcggcaaagcggcggcaagtttaccggcctgttggacttctgcgag
cgcgtcggcaaagaacacatgaaccgccgcaccctcgaagccctgatacgcggcggcgcg
ttcgacagcatcgaacccaaccgcgccatgctcttggcgaacatcgacctcgccatgaac
aacgccgaccaaaaagccgccaacgccaatcagggcgggctcttcgacatgatggaagat
gccatcgaaccggtgcagctcatcgacgcgcccatgtggagcgaatcggaaaaactcgcc
gaagaaaaaaccgtcatcggcttttacctgtccggccacccgttcggcccgtatgcccaa
gaagtccgccaaatcgccccgaccaaattaggccgtctgaaaccgcaagacagcgtgcgc
ctcgccggattcgttaccgccgtgcgcaccatgatgggcaaacgcggcaaaatcgccttc
gtcagcctcgaagatttgagcgggcagattgaaatcatggtcagtggccagacactggaa
aactgcgccgactacctcaaatccgaccaagtgctgattatcgaatccaaagtcagccgc
gacgactacggcggcggcgacgggctgcgcatcatggcaaaccaagtcatgaccctgcaa
atggcgcgcgaacgttacgcccgcagcctcagcctcgccctcgcccccggccacgacatc
gcacgcctcgccgccatcctcaccgcccaccgcctgcccgacacatcgcacatcccgctg
caactgtcgtacagcaacgacaaagcgtcgggcaagtttcaagtgccgccaaaatggatg
gttacgcccagctctgcgttattcgacgaactggaaaaactgctcggcagcagggcagtg
cgcgtgaattggtaa
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