Neisseria sicca: J7445_02540
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Entry
J7445_02540 CDS
T07263
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
nsc
Neisseria sicca
Pathway
nsc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nsc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
J7445_02540 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nsc03019
]
J7445_02540 (pnp)
03016 Transfer RNA biogenesis [BR:
nsc03016
]
J7445_02540 (pnp)
Enzymes [BR:
nsc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
J7445_02540 (pnp)
Messenger RNA biogenesis [BR:
nsc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
J7445_02540 (pnp)
Transfer RNA biogenesis [BR:
nsc03016
]
Prokaryotic type
tRNA degradation factors
J7445_02540 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
OB_RRP5_4th
KH_2
Methyltransf_FA
KH-I_KHDC4-BBP
DUF5813
S1_RRP5
KH_PNO1_2nd
Motif
Other DBs
NCBI-ProteinID:
QTM23651
LinkDB
All DBs
Position
532224..534344
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AA seq
706 aa
AA seq
DB search
MFDKHVKTFQYGNHTVTLETGEIARQAAAAVKVSMGDTVVLVAVTTNKEVKEGQDFFPLT
VDYLERTYAAGKIPGGFFKREGKQSEKEILTSRLIDRPIRPLFPEGFYHDIQIVAMVVSV
DPEIDSDIPAMLGASAALVLSGVPFAGPIGAARVGYVNGVYVLNPTKAELAKSKLDLVVA
GTSKAVLMVESEAKILPEDVMLGAVVYGHDQMQVAINAINEFADEVNPEVWDWKAPETNE
ELVAKVREIAGEAIKEAFKIRQKQARSAKLDEAWNAVKDALITEETDTLAANEIKGIFKH
LEADVVRTQILDGQPRIDGRDTRTVRPLNIQTGVLPRTHGSALFTRGETQALAVATLGTS
RDEQIIDALSGEYTDRFMLHYNFPPYSTGEVGRVGAPKRREIGHGRLAKRALVAVLPSPE
EFSYTMRVVSEITESNGSSSMASVCGGCLSLLSAGVPLKAHVAGIAMGLILDNNKFAVLT
DILGDEDHLGDMDFKVAGTTEGVTALQMDIKIQGITKEIMQIALAQAKDARLHILEQMKA
AVAGPQELSAHAPRLFTMKINQDKIRDVIGKGGETIRAITAETGTEINIAEDGTITIAAT
TQEAGDAAKKRIEEITAEVEVGKVYEGTVVKILDNNVGAIVSVMPGKDGLVHISQIAHER
VRNVSDYLQVGQVVNVKALEVDDRGRVRLSIKALVEAPAREEKAPE
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atgttcgataaacacgttaaaaccttccagtacggcaatcacaccgttactttggaaacc
ggcgaaatcgcacgccaagccgcagcggctgttaaagtatcgatgggcgataccgttgtt
ttggtcgctgtgaccaccaataaagaagtcaaagaaggtcaagactttttccctctgact
gttgattacctcgagcgcacttatgccgcaggtaaaatccccggcggtttctttaaacgc
gaaggcaaacaaagtgaaaaagaaatcctgaccagccgtctgatcgaccgtcctatccgt
ccgctattccccgaaggtttctaccacgacatccaaatcgttgcgatggtggtttccgtt
gatcctgaaatcgattccgatattcctgccatgctcggcgcatccgctgcgctggtgttg
agcggtgtaccgtttgccggtccgattggtgccgctcgcgtaggttatgtaaacggcgtg
tacgtattgaacccgaccaaagccgaattggctaaatccaagctggacttggtggttgca
ggtacatctaaagcagttttgatggtggaatccgaagccaaaatcctgcctgaagatgtg
atgctcggtgccgtagtttacggtcacgaccaaatgcaggtggcgattaatgctatcaat
gaattcgccgatgaagtaaaccctgaagtatgggattggaaagcgcctgaaaccaatgaa
gaattggttgccaaagtacgcgaaattgccggcgaagccattaaagaagcgttcaaaatc
cgtcaaaaacaagcgcgttccgctaaattggacgaagcttggaatgcagtaaaagatgcg
ctaattaccgaagaaaccgatactctggctgccaatgaaatcaaaggcattttcaagcat
ttggaagccgacgttgtccgcacccaaattttggatggtcagccgcgtatcgacggtcgc
gatacccgcaccgtccgtcctttgaacattcaaaccggcgtactgccgcgtacacacggt
tctgccctgtttacccgtggtgaaacccaagcccttgcagtagcgactttgggtacttct
cgcgacgagcaaatcattgatgcgctttccggtgaatacacagaccgcttcatgttgcat
tacaacttcccgccatattctaccggtgaagtgggtcgcgtcggcgcgccgaaacgtcgt
gaaatcggacacggccgcttggcaaaacgcgcactggttgccgtattgccgtctcctgaa
gaattcagctacaccatgcgtgttgtttccgaaattaccgagtccaacggttcgtcttct
atggcttccgtctgcggcggctgcttgagcctgctgtctgccggtgtgcctttgaaagca
cacgttgccggtatcgcgatgggtctgattttggacaacaacaaattcgccgtgttgacc
gacatcttgggtgatgaggatcacttgggcgacatggacttcaaagttgccggtacgacc
gaaggcgtgaccgcgctgcaaatggacatcaaaatccaaggtattaccaaagaaatcatg
cagattgccttggcgcaagccaaagacgctcgtctgcacatcttggaacagatgaaagcc
gccgtggcaggtccgcaagaattgtctgcccatgctccgcgcctattcaccatgaaaatc
aaccaagacaaaatccgcgacgttatcggcaaaggcggcgaaaccatccgcgcgattact
gctgaaaccggtactgaaatcaatatcgcggaagacggcaccatcactattgccgcaacc
actcaagaagcaggcgatgcagcgaaaaaacgcatcgaagaaatcactgccgaagtggaa
gtgggcaaagtatacgaaggtactgtggttaaaatcctcgacaacaacgtcggcgccatc
gtcagcgtgatgccgggtaaagacggtttggtacacatcagccaaatcgcccacgagcgc
gtacgcaacgtcagcgactatctgcaagtcggtcaggttgtaaatgtgaaagcattggaa
gtggacgaccgcggccgcgtgcgcctgtctatcaaagctttggtcgaagctcctgcccgc
gaagaaaaagcacctgaataa
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