Neisseria sicca: J7445_09085
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Entry
J7445_09085 CDS
T07263
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
nsc
Neisseria sicca
Pathway
nsc03030
DNA replication
nsc03410
Base excision repair
nsc03420
Nucleotide excision repair
nsc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nsc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
J7445_09085 (polA)
03410 Base excision repair
J7445_09085 (polA)
03420 Nucleotide excision repair
J7445_09085 (polA)
03440 Homologous recombination
J7445_09085 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nsc03032
]
J7445_09085 (polA)
03400 DNA repair and recombination proteins [BR:
nsc03400
]
J7445_09085 (polA)
Enzymes [BR:
nsc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
J7445_09085 (polA)
DNA replication proteins [BR:
nsc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
J7445_09085 (polA)
DNA repair and recombination proteins [BR:
nsc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
J7445_09085 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
J7445_09085 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
QTM22664
LinkDB
All DBs
Position
complement(1938425..1941214)
Genome browser
AA seq
929 aa
AA seq
DB search
MSKPTLLLVDGSSYLYRAYHAMAQLTAPDGAPTGALYGVLNMLRRLRADYVHDYCAVVFD
AKGKNFRHEMFPDYKATRPPMPDDLRPQAEALPDLVRLMGWPVLVIPQVEADDVIGTLAA
MAGEAGWNVVVSTGDKDMAQLVNERVTLVNTMSGETLDIEGVKEKFGVRPDQIRDYLALM
GDKVDNVPGVEKCGPKTAVKWLEAYGSLDGVMEHAAEIKGKVGENLQAALPQLPLSYDLV
TIKTDVDLHTELSDGLESLRRTSPKWSQLAVDFKRWGFRTWLKEAESRMHEAADGDLFGS
DTIGEQAALDMETSSERLHEKAVAPEKLDYQAVTTEAQFAALLDKLSQADKIGIDTETTS
LDAMNASLVGISIAFQAGEAVYIPVGHSLTAAPEQLDLQDVLGRLKPHLENPALKKIGQN
LKYDQHVFANYGIALNGIAGDAMLASYIIESHLGHGLDELSERWLGLETITYESLCGKGA
KQIGFADVAIEQATEYAAQDADFALRLEAHLRAQMDAKQLEMYEKMELPVAQVLFEMERN
GVQIDRAELARQSAELGAELMKLEQEAYAAAGQPFNLNSPKQLQEILFDKMGIPTKGLKK
TAKGGISTNEAVLEQLAPDYPLPKIILQNRSLAKLKSTYTDKLPEMISPKDGRVHTTYAQ
AVAITGRLASNNPNLQNIPIRTAEGRRVRRAFTAPQGSVIVSADYSQIELRIMAHLSGDK
TLIAAFQNGEDVHRRTAAEVFGIAPENVSSEQRRYAKTINFGLIYGMGQYGLAKSLGIDN
ISAKNFIDRYFARYPGVAEYMQRTKEQAAAQGFVETLFGRRLYLPDIHNKNANARAGAER
AAINAPMQGTASDLIKRAMIDVSRWLSDDLLQSKLIMQVHDELVLEVPEAELDLVKGKLP
QIMAKVDGGMLNVPLVAEVGVGMNWEEAH
NT seq
2790 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaacccacccttctcctcgttgacggctcttcttatctctaccgcgcatatcat
gcaatggcgcaattgactgcgcctgacggtgcgccgacgggtgcgctttacggcgtgttg
aacatgttgcgccgtctgcgggcggattatgtgcacgattattgcgcggtggtgtttgat
gcgaagggcaagaatttccgccacgagatgttccccgactataaggcgacgcgcccgccg
atgccggacgatttgcgcccgcaagcggaagccttgccggatttggtgcggctgatgggc
tggccggtgttggtcattccgcaagtcgaagcggacgacgtgatcggcacgctggcggcg
atggccggcgaagcgggttggaatgtggtggtgtccactggcgataaggacatggcgcaa
ttggtgaacgagcgcgttacgctggtgaacacgatgagcggcgaaacgctggacattgaa
ggcgtgaaggaaaaattcggtgtgcgccccgaccaaatccgcgattatctcgcactgatg
ggcgacaaggtggacaatgtgccgggcgtggagaagtgcggcccgaaaacggcggtgaag
tggctggaagcctacggctcgctggatggtgtgatggaacacgctgcggaaatcaagggc
aaggtcggcgaaaacctgcaagccgcgctgccccaactgccactttcgtatgatttggtg
acgattaaaaccgatgtggacttgcacaccgagctttcagacggcctcgaaagccttcgc
cgtacttcgccgaaatggtcgcagcttgcggtcgatttcaaacgctggggcttccgcact
tggctgaaagaagcagaaagccgtatgcacgaagcagcggacggcgatttgtttggcagc
gatacaataggcgaacaggcagcgttggacatggaaacgtcgtctgaaaggctacatgaa
aaagccgttgcgcccgaaaaactggattatcaagccgttaccaccgaagcgcagtttgcc
gccttgttggacaaactgtcgcaggcggacaaaatcggtattgatacggaaaccacatct
ttagacgcgatgaacgcctcgctggtcggcatcagcatcgcgttccaagcgggcgaagcg
gtttacatccccgtaggacacagcctgactgctgcgccagaacagcttgatttgcaggat
gtattaggtcgtctgaaaccgcatttggaaaaccccgccctgaaaaaaatcgggcaaaac
ctcaaatacgaccaacacgttttcgccaactacggcatcgccctgaacggcattgccggc
gacgccatgctcgcttcctacatcatcgagagccatctcggacacggcttggacgaattg
tccgaacgctggctcggcttggaaaccattacctacgaatcgctgtgtggcaaaggcgcg
aagcaaatcggttttgccgacgtcgccattgagcaggcgaccgaatacgccgcccaagac
gcagatttcgccctgcgcctcgaagcgcacctgcgtgcgcaaatggacgccaaacagctt
gaaatgtatgaaaaaatggagctgcccgtcgcgcaggtattgtttgaaatggaacgcaac
ggcgtacaaatcgaccgtgccgaactcgcccgccaaagcgcagaactcggcgctgagctg
atgaagctcgaacaggaagcctatgccgccgcaggccagccgttcaacctcaactcgccc
aaacagctgcaagaaatcctgttcgacaaaatgggcatccccaccaaaggcctgaaaaaa
accgccaaaggcggcatttccaccaacgaagccgtgctcgaacagctcgcgcccgactac
cccctgcccaaaatcatcctgcaaaaccgcagtctagcgaagctcaaatccacctacacc
gacaaactgcccgaaatgatttcgcccaaagacggccgcgtgcacaccacctacgcccaa
gccgtcgccattaccggccgcctcgccagcaacaaccccaacctgcaaaacatccccatc
cgcaccgccgaaggccgccgcgtgcgccgcgccttcaccgcaccgcaaggcagcgtcatc
gtttccgccgactattcccaaatcgagctgcgcatcatggcgcacctctccggcgacaaa
accctcattgccgcgttccaaaacggcgaagacgtacaccgccgcaccgccgccgaagta
ttcggcatcgcccccgaaaacgtctcgtccgaacaacgccgctacgccaaaaccatcaac
ttcggcctcatttacggcatgggccaatacggcctcgccaaatcactgggtatcgacaac
atctccgccaaaaactttatcgaccgctacttcgcccgctatcccggcgtcgccgaatac
atgcagcgcaccaaagaacaagccgccgcacaaggctttgtcgaaaccctgttcggccgc
cgcctctacctgcccgacatccacaacaaaaacgccaacgcccgcgccggagccgaacgc
gccgccatcaacgcccccatgcagggcactgcgtccgacctcatcaaacgcgccatgata
gacgtatcccgctggctttcagatgacctcttgcaaagcaaactgattatgcaggtacat
gacgaattagtgttggaagtacccgaagccgaactggatttagtgaaaggaaaactgccg
cagattatggcgaaagtggacggagggatgttgaacgtgccgctggtggcggaagtgggc
gtaggaatgaattgggaagaagcgcattga
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