Neisseria sicca: J7445_10010
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Entry
J7445_10010 CDS
T07263
Name
(GenBank) RNB domain-containing ribonuclease
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
nsc
Neisseria sicca
Brite
KEGG Orthology (KO) [BR:
nsc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nsc03016
]
J7445_10010
Enzymes [BR:
nsc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
J7445_10010
Transfer RNA biogenesis [BR:
nsc03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
J7445_10010
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
Motif
Other DBs
NCBI-ProteinID:
QTM22833
LinkDB
All DBs
Position
complement(2111739..2113601)
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AA seq
620 aa
AA seq
DB search
MNIFYEESGQFKVAAIVQKNDATYQVDTQHGKRTKVKANNVFAEFDGDMAAFLENAQAQA
ADIDTDLLWEVCGEEEFSAEAIAEEYYGHAPTKTELAATLIALYAAPMYFYKKAKGVFKA
APEETLKQALAAIERKKQQDAQIDAWAEALKRGEMPSEIAADLKTILHAPDKQSLTYKAF
TKAADALKTSAYELAKKTGGITSIPQYLQDGFEIKYFPKGTGFPDLPLPEMPDLPKADVT
AFSIDDESTTEVDDALSLTDLGNGTKRVGIHIAAPSLAIKPGDKMEKNIMERLSTVYFPG
GKITMLPENWIAAFSLDAGAYRPAVSIYFDVDGEFNVGEPTCKIEAVNIAENLRIQTIEP
HFNAETGLDEAGEMMFAHHQDLIWFYQFAVALQKARGKYEPDRAPQYDYSIELDEAGKVS
VVRRERGSPIDILVSEMMILANSTWAQMLHDNDLPGLFRVQPAGKVRMSTKSEPHIGMGV
QHYGWFTSPLRRAADYINQKQLLSLIDDTAEPLFQQSDAELFAALRDFDTAYTAYADFQR
QMEAYWSLVYLQQQGTSELTATILKEDLVRIEGLPLVTRATGIPFDALPKTQVLLKITEL
DPEKQFIALNYVKAVAPAVA
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atgaatatcttttacgaagagtccggccaattcaaagtcgccgccatcgtccaaaaaaac
gacgccacctaccaagtcgatacccaacacggcaagcgcactaaagtgaaggcgaacaac
gtctttgccgagtttgacggcgatatggcggcatttttggaaaacgcgcaggcgcaggct
gcggacatcgacaccgatttattgtgggaagtatgcggcgaagaagaattttccgccgag
gcgattgccgaagaatattacggccatgcgccgaccaaaaccgagctggcggcgaccttg
attgcgctttacgccgcgccgatgtatttctacaaaaaagccaaaggcgtgttcaaagcc
gcacctgaagagactttgaaacaagcacttgccgccatcgaacgcaaaaaacaacaagac
gcgcaaatcgatgcttgggcggaagccttgaaacgcggcgagatgccgtctgaaatcgcg
gcggatttgaaaaccatcctacacgcgcccgacaagcagtcgctgacctacaaagccttt
accaaagccgccgacgcgctgaaaacctccgcctacgaattggcgaaaaaaacgggcggc
attacgtccatcccccaatatctgcaagacgggtttgaaatcaaatacttccctaaagga
acaggctttcccgacctccccttacctgaaatgcccgacctgcccaaggccgatgttacc
gccttttccatcgacgacgaatcaaccaccgaagtggacgacgctttaagcctgaccgat
ttgggcaacggcacgaagcgcgtcggcatccatatcgccgcgccgtcgcttgccattaaa
ccaggcgacaaaatggaaaaaaacatcatggaacgcttgagtacggtctattttcccggc
ggcaaaatcaccatgctgcctgaaaactggattgccgcgttcagccttgatgcaggcgcg
taccgtcctgccgtcagcatttatttcgatgtggacggcgagttcaatgtcggcgagccg
acctgcaaaatcgaagccgtcaatatcgccgaaaacctgcgcatccaaaccattgagccg
catttcaacgccgaaaccggcttggacgaagccggcgaaatgatgttcgcccaccatcaa
gacctgatttggttctaccaattcgccgtcgccctgcaaaaagcacgcggcaaatacgaa
cccgaccgcgcgccgcaatacgattacagcattgaattggatgaggcaggcaaagtctcc
gtcgtccgccgcgaacgcggttcgcccatcgacattctggtcagcgaaatgatgatactc
gccaacagcacttgggcgcagatgctccatgacaacgacctgcccggcctcttccgcgtc
caaccggcaggcaaagtgcgcatgagcaccaaatccgagccgcacatcggcatgggcgta
cagcattacggctggttcacctcgccgctgcgccgcgccgccgactacatcaaccaaaaa
caacttctcagcttgatagacgacaccgccgagccgctcttccagcaaagcgatgccgaa
ctcttcgccgccctgcgcgacttcgacaccgcctacaccgcctacgccgacttccaacgg
cagatggaagcctactggagcctcgtgtacctgcaacagcaaggcacaagcgaactgacc
gcgaccatcctcaaagaagacctcgtccgcatcgaaggcctgccgctggtaacccgcgcc
accggcatcccgttcgacgcgctgcccaaaacgcaagtcctgctcaaaatcaccgagctt
gatcccgaaaagcagtttatcgcgctgaattatgtgaaagccgtcgctcctgcggttgcg
taa
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