Neisseria sicca: J7445_10755
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Entry
J7445_10755 CDS
T07263
Name
(GenBank) DUF3418 domain-containing protein
KO
K03578
ATP-dependent RNA helicase HrpA [EC:
5.6.2.6
]
Organism
nsc
Neisseria sicca
Brite
KEGG Orthology (KO) [BR:
nsc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nsc03019
]
J7445_10755
Enzymes [BR:
nsc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
J7445_10755
Messenger RNA biogenesis [BR:
nsc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
J7445_10755
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3418
OB_NTP_bind
HA2_C
HA2_N
TraI_middle
zf_C2H2_ZNF598
Motif
Other DBs
NCBI-ProteinID:
QTM22964
LinkDB
All DBs
Position
complement(2272215..2275541)
Genome browser
AA seq
1108 aa
AA seq
DB search
MQNTKNQARGSGIHARHNPTNDKTVSDDLQNFSGNIVAPPRYRLTRLGEQMARLPIDPKI
ARILLAAKKHDCMAEILVIASALSIQDPRERPLEARDAAAKAHERFTDKQSDFLAYLNIW
DSFQRERDKGLSNKQLVQWCRQYFLSHLRMREWRELHHQLAQTAIEMGLTTKEAAFRRPP
EVRQLTSSESQGDQDLSAKLKQKQLDKKQHRAQIRAAKEAGYEQIHRALLTGLIANVGMK
SPDGNDYTGARGSRFHLFPASALFKAKPKWVMAAELVETTKLYARDVAAIQPEWIEQEAP
HLVRYHYFEPHWEQKRGEVIASERVTLYGLTVLPRRPVSYGRIAPEEAREIFIRSALVAQ
ECDLKADFFVHNKMLIKEITELEHKSRKQDVLVDDEALFAFYNERLPDFYTADAVSDDLH
TENSLHSRRLPENPQQTAPSPVGEGWGEGKTVAAQTNFSATAANPLPQEREQSAAASTVS
DAPKAQRLPENSLCYADGQPILLGDRVTIDSKQWHGKIVALIAEQQCDPSIGSAEEWATL
QSGVMAQFDEAGLVHYPDAETAGELILLARADAADVLKSQKDNRVREPSSHTLQNISDDP
KPKKQPAPPKGRLKPLPLADIGTFQAWLKTAERDNPRLLFLSRDDLMQHAAAHITEEQFP
KHWQTADGKFKLSYRFEPHHPLDGVTLTLPLTVLNRISPAALEWLVPGMIREKIQLQIKA
LPKQIRRICVPVPEFITQFLSQNPDRNAPILPQLAQAIAKTAGDIRILEQINQDEWAAFR
LPEHCYFNLRIIDDGGQELAMGRDLIQIQQQLGKAAATTFRDNTQEFERDNVTTWDIGTL
PESIKFARGKQQLTGYLGLQKEKDGRIALRLFDTSAAAEQAHRLGVIELMKLQLKEQVKD
LNKGIQGFTQAAMLLKHINADTLRDDLTQAVCDRAFIGEDELPRNEKAFKEQIKRARSRL
PAVKEALSRYLQETAAAYAELNGKLGKHPLTHLLRQRLQTLLAAGFATRTPWVQWPRLPI
YLKAMTLRLEKYSSNPARDAAREADIQELEQMWQEKTDGLVKQGLPVSDDLAAFRWMIEE
LRVSLFAQELKTPYPVSVKRLLKEWEKS
NT seq
3327 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaacactaaaaatcaagcacgcggctcaggcattcacgcccgacacaatccgaca
aacgacaaaaccgtttcagacgaccttcaaaacttttcaggcaatatcgtcgcccctccc
cgctaccgcctgacccgcctcggcgagcaaatggcgcgcctgcccatcgacccgaaaatt
gcgcgcattttgctggcggcgaagaaacacgactgcatggcggaaatattggtgattgcg
tccgcgctgtcgattcaagacccgcgcgaacggccgctggaggcacgcgatgccgccgcc
aaggcacacgaacgctttaccgacaagcagtccgatttccttgcctacctgaacatttgg
gacagcttccagcgcgagcgcgataaaggcttgtccaacaagcagttggtgcagtggtgc
cgccaatatttcctgtcgcacctgcggatgcgcgagtggcgcgagttgcatcaccagctt
gcccaaaccgcgattgaaatgggtttgaccaccaaggaagccgctttcagacgacctccc
gaagtcaggcagctcacgtcgtctgaaagccaaggcgaccaagacttatccgccaaactc
aaacaaaaacaactggataagaaacaacaccgcgcccaaatccgcgccgccaaagaagcg
ggctacgaacaaatccaccgcgccctgctcaccggccttatcgccaacgtcggcatgaaa
tcgcccgacggcaacgactacaccggcgcgcgcggcagccgcttccaccttttccccgcc
tccgccctgttcaaagccaaacccaaatgggtgatggcggcggaactcgttgaaacaacg
aaactttacgcgcgcgacgtagccgccatccagcccgaatggatcgagcaggaagcgccg
cacctcgtccgctaccactatttcgagccgcattgggaacaaaaacgcggcgaagtcatc
gccagcgaacgggtaacgctctacggcctgaccgtcctgccgcgccgccccgtgtcctac
ggcagaatcgcccccgaagaagcgcgcgaaatctttatccgcagcgcgttagtggcgcag
gaatgcgatttgaaagcggacttttttgtccacaacaaaatgctgattaaggaaattacc
gaactcgaacacaaatcgcgcaagcaggatgtactggtcgatgatgaagccctgtttgcg
ttttataacgaacggctgcccgatttttatacggcggacgcggtttcagacgacctgcac
accgaaaacagcctgcactcccgaagactacctgaaaatccccagcaaaccgccccctcc
cccgtgggggagggttggggagagggcaaaacagttgccgcacaaaccaacttttccgca
accgcagcaaaccctctcccacaggagagggaacagagtgccgcagcttcaacggtttca
gacgcccccaaagcccaaaggctacctgaaaactccctatgctacgccgacggtcaaccg
atactgctgggtgaccgtgtaacgatcgacagcaaacaatggcacggcaaaatcgttgcc
ttgattgccgagcagcaatgcgacccgtccatcggttccgccgaagaatgggcgacatta
caaagtggcgtaatggcacaatttgacgaagcaggcttggtgcactatcccgatgccgag
actgccggcgaactcatcttattggcacgagcggatgcagcagatgtcctaaaatctcaa
aaggacaaccgcgtgcgtgaaccgagttcacacaccctacaaaacatttcagacgatccc
aaacccaaaaagcagcctgcacccccaaaaggccgtctgaaacccctccccctcgccgac
atcggcaccttccaagcctggctcaaaaccgccgaacgcgacaacccgcgcctgctgttc
ctcagccgcgacgacctcatgcagcacgctgccgcgcacatcaccgaagaacaattcccc
aaacactggcaaaccgcagacggcaaattcaaactcagctaccgcttcgaaccgcaccac
ccgctcgacggcgttaccctcaccctgccgctcaccgtgctcaaccgcatcagccccgcc
gccctcgaatggctcgtgcccggcatgatacgcgaaaaaatccagctacaaatcaaagca
ttgcccaaacaaatccgccgcatctgcgtgcccgtgcccgaattcatcacccaattttta
agccaaaaccccgaccgcaacgcccccatcctgccccagctcgcccaagccatcgccaaa
accgcaggcgacatccgcatactggagcaaatcaaccaagacgaatgggccgcgttcagg
ctgcccgaacactgctatttcaacctccgcatcatcgacgacggcgggcaagaattagcc
atggggcgcgatttaatccaaatccaacaacaacttggcaaagccgccgccaccaccttc
cgcgacaacacccaagaattcgagcgcgacaacgttaccacgtgggacatcggcaccctg
cccgaatccatcaaattcgcccgcggcaaacaacagctcaccggctacctcggcctgcaa
aaagaaaaagacggccgcatcgccctgcgcctgttcgacacgtctgccgccgccgaacaa
gcccacagattaggcgtgatcgaactcatgaaactacaactaaaagaacaagttaaagac
ctgaacaaaggcatccaaggcttcacccaagccgccatgctgctcaaacacatcaacgcc
gacaccctgcgcgacgacctcacccaagccgtctgcgaccgcgcctttatcggcgaagac
gagctgccgcgcaacgaaaaagccttcaaagaacaaatcaaacgcgcccgcagccgcctg
cccgccgtcaaagaagccctcagccgttacctgcaggaaaccgccgccgcctacgccgaa
ctaaacggcaaactcggcaaacacccgctcacccacctcctgcgccaacgcctgcaaacc
ctgctcgccgccggcttcgccacccgcaccccgtgggtacaatggccgcgcctccccatc
tacctcaaagccatgaccctgcgcctcgaaaaatacagcagcaaccccgcccgcgacgca
gcccgcgaagccgacatacaggaattggaacaaatgtggcaggaaaaaacagacggcttg
gtgaaacaaggactacccgtttcagacgacctcgccgcgtttagatggatgattgaagaa
ttgagagtgtcgctgtttgcgcaggaattgaaaacaccgtatccggtgtcggtgaaaagg
ttgttgaaggagtgggagaagagttaa
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