Neisseria sicca: J7445_10770
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Entry
J7445_10770 CDS
T07263
Symbol
hrpA
Name
(GenBank) ATP-dependent RNA helicase HrpA
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
nsc
Neisseria sicca
Pathway
nsc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nsc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
J7445_10770 (hrpA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nsc03041
]
J7445_10770 (hrpA)
03009 Ribosome biogenesis [BR:
nsc03009
]
J7445_10770 (hrpA)
Enzymes [BR:
nsc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
J7445_10770 (hrpA)
Spliceosome [BR:
nsc03041
]
Complex A
U2 snRNP components
U2 related factors
J7445_10770 (hrpA)
Complex B
J7445_10770 (hrpA)
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
J7445_10770 (hrpA)
Ribosome biogenesis [BR:
nsc03009
]
Eukaryotic type
90S particles
Helicases
J7445_10770 (hrpA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
AAA_22
AAA_19
AAA_23
nSTAND3
AAA_30
ABC_tran
ResIII
NACHT
AAA_11
RsgA_GTPase
T2SSE
SRP54
SLFN-g3_helicase
PhoH
cobW
AAA_25
AAA_29
Motif
Other DBs
NCBI-ProteinID:
QTM22966
LinkDB
All DBs
Position
complement(2278101..2279495)
Genome browser
AA seq
464 aa
AA seq
DB search
MPHPDFSQTLSKDRHFLRSAFKNPNKYGGLSKVEEKYQKSHEIFLKRLAALPKPEFDNTL
PVHEKLEEIKKAVAENQVTIICGETGSGKTTQLPKICLELGRGAAGLIGHTQPRRLAARS
VAERIAEELKSEIGSAVGYKVRFTDHTSRDACVKLMTDGILLAETQTDRYLAAYDMIIID
EAHERSLNIDFLLGYLKQLLPRRPDLKVIITSATIDAERFSQHFNGAPVLEVSGRTYPVE
ILYRPLTSKDEDDAEVELTDAIVDAADELARHGEGDILIFLPGEREIREAAEALRKSTLR
RNDEILPLFARLSHAEQHKIFHPTGAKRRIVLATNVAETSLTVPGIKYVIDTGLARVKRY
SARAKVEQLHVEKISQAAARQRSGRCGRVSAGVCIRLFSEEDFNSRTEFTDPEIVRSNLA
AVILRMAALKLGDVAAFPFLEMPDSRYINDGFQVLLELGAVEVV
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgccccatcccgatttctcccaaaccctctccaaagaccgacacttcctgcgttccgcc
ttcaaaaatcccaacaaatacggcggcttgtccaaagtcgaagaaaaataccaaaaatcg
cacgaaatctttttgaagcgtttggcagcattgcccaaacccgaattcgacaacaccctg
cccgttcacgaaaaactcgaagaaatcaaaaaagccgttgccgagaatcaggtaacgatt
atttgcggcgaaaccggttcgggcaaaaccacgcagttgcccaagatttgcttggaactc
gggcgcggggcggcggggctgatcgggcatacccagccgcgccgtttggccgcgcgctcg
gtggcggagcggattgccgaagaattgaaatcggaaatcggcagcgcggtcggctataaa
gtgcgctttaccgaccacacctcgcgcgatgcctgcgtcaagctgatgaccgacggcatt
ctgctggcggaaacccagaccgaccgttatctcgccgcctacgacatgattatcatcgac
gaagcgcacgaacgcagcctgaacattgactttctactgggctacctgaaacagctacta
ccgcgccgccccgatttgaaagtcatcatcacctcggcaaccatagacgcagaacgcttc
tcccaacacttcaacggcgcgcccgtgctggaagtgagcgggcgcacctatcccgtcgaa
atcctctaccgcccgctgaccagcaaagacgaagacgacgcggaagtagaactgaccgac
gcgattgtcgatgcggcggacgaattggcgcgacacggcgaaggcgatattttgatattc
ctgccgggcgaacgcgaaatccgcgaagccgccgaagccctgcgcaaatccacactgcgc
cgcaacgacgaaatcctgcccctgttcgcacgcctgtcgcacgccgaacagcacaaaatc
ttccaccccacaggcgcgaaacgccgcatcgtactggcaaccaacgtcgccgaaacctcg
ctcaccgtgccgggcatcaaatacgtcatcgacaccggcctcgcgcgcgtcaaacgctat
tccgcacgggcgaaagtggagcagcttcatgtcgaaaaaatctcccaagccgccgcacgc
caacgctccggccgctgcggacgcgtctccgcaggcgtgtgtatccgcttattttcagaa
gaagatttcaacagccgcaccgaatttaccgaccctgaaatcgtccgcagcaacctggcc
gccgtcatcctgcgcatggcagcattgaaactcggcgacgtagcggcattcccgttttta
gaaatgcccgattcgcggtatatcaatgatggttttcaggtgttgctggaattgggggcg
gtggaggtcgtctga
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