Neisseria sicca: J7445_11705
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Entry
J7445_11705 CDS
T07263
Symbol
rlmD
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
nsc
Neisseria sicca
Brite
KEGG Orthology (KO) [BR:
nsc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
nsc03009
]
J7445_11705 (rlmD)
Enzymes [BR:
nsc01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
J7445_11705 (rlmD)
Ribosome biogenesis [BR:
nsc03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
J7445_11705 (rlmD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Methyltransf_15
Methyltransf_ANTKMT
TRAM
Methyltransf_25
TRM5-TYW2_MTfase
MTS
PrmA
UPF0020
Methyltr_RsmB-F
PCMT
PabTrmU54_TRAM_dom
Methyltransf_11
Methyltransf_32
Cons_hypoth95
RrnaAD
Methyltransf_23
DUF3864
Motif
Other DBs
NCBI-ProteinID:
QTM24338
LinkDB
All DBs
Position
complement(2484929..2486305)
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AA seq
458 aa
AA seq
DB search
MPCRAKWIFLMKMRTDNRQYEGEADIFSLDYEGRGVARVNGKALFIEGAIPGERVRFEII
RSKKQFDEARVIDITRYSENRVEPKCRYFDTCGGCSIQHIDSTAQIAFKQRIMEEQLERI
GKIRPKQILPAIYGTPWHYRERARLSISKDAGGRLKIGFKAKKSHEVIDVDSCMVLPAHI
SEKLPKIKQMLQSLIDLDLLFIEFFNSEKLTVLNICSGKKPPSQKLRQLEKWFDTIFGHE
KKQWQIWLQARRQEAQPFYPKDCQPLGYALPEFEVEMPYKPGDFTQINAGLNGVMVGRAL
KLLDIQKNERIADLFCGLGNFSIPMAKSGAEVVGIEGEGSLVKRARNNASANGCSDRVSF
FEADLFETDEVVVASWGQFDKMLLDPPRGGAYAVVKSLHAPYLPVKIVYVSCNPATFARD
AEVLVNKGYRLKFAGVMNMFAQTSHVESIGVFDLENGI
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
gtgccctgtcgggcaaaatggattttcttgatgaagatgcggacagataacaggcaatat
gagggcgaggcggatattttttctttggattatgaaggaagaggtgtcgcgcgcgttaat
ggtaaggcattgtttattgaaggagcgataccgggtgagcgggtacggtttgaaatcatc
cgttcaaaaaaacaatttgatgaggcacgggtcattgacatcacccgatattcggaaaat
cgagttgagccgaagtgtaggtattttgatacatgcggtggttgttcaatacagcacatt
gattcgacagcccagattgcatttaaacaacgcattatggaagagcagttggaacgcatc
ggcaaaatccgacccaagcagattctcccagctatatatggaacaccatggcattatcgg
gagcgtgccagactgagtatttcaaaggatgcaggtggtcgtctgaaaatcggttttaag
gcaaaaaagagtcatgaagtgattgatgtcgattcatgtatggtgttgccggctcatatt
tctgagaagttgccaaaaataaagcaaatgttgcaaagtttgatagatttggatttgcta
ttcattgagttttttaatagcgaaaaactaacggttttgaacatttgttccggaaaaaaa
ccgcctagtcaaaaattgagacaacttgaaaaatggtttgatacgatattcggtcatgag
aaaaaacagtggcagatttggctgcaagcccgaagacaggaggcccagccattctatccg
aaagattgtcagcctttgggatatgctttacctgagtttgaggttgaaatgccgtacaaa
cccggggattttacccagattaatgcaggcttaaatggagtgatggttggcagggctttg
aaacttctagatattcagaaaaacgagcgtattgcagatttgttttgcgggcttggaaac
ttcagtattcctatggcaaaaagtggggctgaagtggttggaatcgaaggtgaaggttcg
ttggttaagcgagcacgaaacaatgcttcggctaacggttgttccgatagggtatccttc
tttgaagcggatttgtttgaaacagatgaggttgtggtagcgtcatggggtcaattcgac
aagatgttgcttgatcccccgagaggtggtgcctatgctgttgtcaaatcactacatgct
ccgtatttgccggtaaagatagtatatgtttcttgcaatccggcaacctttgccagagat
gcggaagtattggtaaataagggttataggctgaaatttgcaggcgtaatgaatatgttt
gcacagacttcgcatgtcgaatctataggtgtcttcgatttggaaaatggtatatag
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