Nonlabens tegetincola: BST91_02350
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Entry
BST91_02350 CDS
T04875
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
nsd
Nonlabens tegetincola
Pathway
nsd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nsd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BST91_02350
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nsd03019
]
BST91_02350
Enzymes [BR:
nsd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
BST91_02350
Messenger RNA biogenesis [BR:
nsd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BST91_02350
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
UTP25_NTPase-like
Cas3-like_C_2
CMS1
TMEM240
Motif
Other DBs
NCBI-ProteinID:
ARN70580
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All DBs
Position
455569..456921
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AA seq
450 aa
AA seq
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MNTFTELELRTPLRKSIEDLGFQTMTPIQEKSYSVVASGRDVIGIAQTGTGKTLAYMLPL
LNSLPYAQIDDPRILVLVPTRELVVQVVDNIKSYSAQMKLRVQGVYGGTNINTQKKALAN
GVDIVVATPGRLYDLIVHQSISFKHCKKVVIDEVDVMLDLGFRFQLTNIFDHLPNKRQNI
MYSATMTDQIEAFIEDYFYNPTKVSVAVSGTRLDNINQQCIAVPNFYTKVNVLMHLISDH
EVYSKVLVFVDNKRSADRLHEVILPHYGNEVAVIHSNKTQNYRLRSIEAFTNGDCRILVA
TDVMARGLDIEGISHVINIDVPAFPENYMHRIGRTGRAQNAGNSILFYTEKEIESKQAIE
QLMDYSIPEVAFPDEVEVSKQKTPEEKPKVREIFNPNKVEEEERGAAFHEKKDKNKKTNQ
GGSYRRKMAAKYKKPKTRGDKNANRRRKKR
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgaatacctttactgaattagaacttagaacaccgctgcgtaaaagtatagaagaccta
ggttttcaaaccatgactcctatacaggaaaagtcctattcagtggtagcatcaggacgt
gatgttataggtattgcccaaacgggtacagggaaaactcttgcttacatgcttccctta
cttaattctttaccctatgcacaaatcgatgatcctagaatcttggtgctcgtgcctacc
cgtgaattagtagtgcaggtagtggataatattaaatcctattcagcgcaaatgaagcta
agggttcaaggagtttatggaggcactaatattaacacgcaaaagaaagctctggcaaat
ggtgttgatattgtagtagcaactccaggaaggttgtatgatcttatagtacatcaatct
ataagttttaaacattgcaaaaaggtggttatcgatgaggtagatgtgatgttggattta
gggtttagatttcaacttaccaatatctttgatcatttacctaataaaagacagaatatc
atgtattctgcaacaatgactgatcaaatagaagcctttatcgaggactatttttacaac
cctaccaaggtgtctgtagcagtttctggaacaaggctggataacataaatcaacaatgt
atagcagtacctaacttttatactaaggtaaatgtactcatgcatcttataagtgatcac
gaggtttatagtaaagtactggtttttgtagataataaacgtagtgccgataggttgcat
gaggtcatcctacctcactacggtaatgaagtagcagttattcattccaacaaaacacaa
aattatcgtttgcgatctattgaggcatttacaaacggtgattgtcgtattcttgtagct
acagatgtaatggcacgtggactggatattgagggaatttcacacgttattaatatcgat
gtacctgcatttcctgaaaactacatgcatcgtataggacgtactggtagggctcaaaat
gctggtaattctattttattctacactgaaaaggagatagaatcaaaacaagctattgaa
caacttatggattattctattccagaagttgcctttcctgatgaagttgaagtgtcaaaa
caaaaaactcctgaagaaaaacccaaggtcagagaaattttcaatcctaataaagtagaa
gaagaagagcgtggtgccgctttccatgaaaaaaaggataaaaacaaaaaaacaaatcaa
ggtggtagttaccgtcgcaaaatggcggctaagtataaaaagcccaaaacacgtggcgat
aagaatgccaatcgccgtcgcaagaaaaggtaa
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