Nonlabens tegetincola: BST91_09560
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Entry
BST91_09560 CDS
T04875
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
nsd
Nonlabens tegetincola
Pathway
nsd03030
DNA replication
nsd03430
Mismatch repair
nsd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nsd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BST91_09560
03430 Mismatch repair
BST91_09560
03440 Homologous recombination
BST91_09560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nsd03032
]
BST91_09560
03400 DNA repair and recombination proteins [BR:
nsd03400
]
BST91_09560
Enzymes [BR:
nsd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BST91_09560
DNA replication proteins [BR:
nsd03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BST91_09560
DNA repair and recombination proteins [BR:
nsd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BST91_09560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
RNase_T
tRNA_anti-codon
Intimin_C
Motif
Other DBs
NCBI-ProteinID:
ARN71876
LinkDB
All DBs
Position
2065195..2069541
Genome browser
AA seq
1448 aa
AA seq
DB search
MYLIFDTETTGLPKRWDAPITDTDNWPRVVQIAWQLHDEMGNLIEHEDYLIKPDGFDIPY
DSERVHGISTQLAQEQGIALEEMLEKFNIALSKTKFVVGQNLNFDLMVTGSEFVRAQIAN
QLQEIPVLDTCTEHTAQLCQIPGGRGGKFKLPTLTELHEFLFGEPFSEAHNATADVEATT
RCFLELVRKQQYTREQLDVEEDYFLRFKQSNPSTIAPVGLKHVNLQKASAALKKDEEPVV
SNQEIKENLAELSDAPFVHLHNHSQFSILQSTASVKDLAEAAAANNMTAVAMTDHANMMG
AFHFVRAIQAVNKTLADGEEEREPLKAIIGCEFQVCENMNDKSIKDNGYQIVILAKNKKG
YHNLAKLASKAFTDGFYYVPRIDKELLLQYKDDLIVLTGNLYGEVPSKILNIGEKQAEEA
LLWWKQNFGDDLYIEIMRHGQEDETRANQVLIALSRKHDIKIVATNNTYYIHKEDANAHD
ILLCVRDGEKQSTPIGRGRGYRYGLPNDQYYFKSSEEMKELFKDLPDAILNIKEVIDKIE
PFELARDVLLPAFDIPERFIDPDDATKGTKNGENAYLRFLTYEGAKERYGEELTDDIKER
LDFELDVIAKTGYPGYFLIVWDFIKAARDMGVAVGPGRGSAAGSAVAYCLKITNVDPIHY
DLLFERFLNPDRVSMPDIDIDFDDENRYKVMDYVIEKYGSNQVAQIITYGTMAAKSSIRD
TARALDLPLMDADRVAKLIPDFAKLKKMFALEEKEIGSKFRGEDADNVRELLQLSEGNDL
TADTIQKARILEGSVRNTGVHACGVIITPDDLTNFVPVATAKNSDLYVTQFDNEVVESAG
LLKMDFLGLKTLSQIKDTVAIIKERHGIDIDIEAIPLDDPKTYELFQRGETTGIFQYESV
GMQKYMRELKPTQFPDLIAMNALYRPGPLEYIPEFIARKHGDKEIVYDLEACEEYLAETY
GITVYQEQVMLLSQKLANFSKGDADVLRKAMGKKQMATLMKMKPKFLDAGEKNGHDREVL
EKIWKDWEAFASYAFNKSHSTCYAWIAYQTAYLKANYPAEFMAATLSNNMNNIKDVTKFM
DECRRMGLDVLGPDVNESNYKFTVNKEGAVRFGMGAVKGLGHGAVMTIIENRKDGPYKSI
FDLGKRIDLRAANKKSFEALALSGGFDSLGGENRALYFHAADNGQTFLEQVIKYAQKYQE
NENSAQMSIFGEASEVQIPEPMLPVCESWGTMEKLKREKEVVGIYISGHPLDDYKKEMQF
FCNSNLNAMKVLPELVGKELTFAGVISSVSHMMSKQNKPWGMFTLEDYDESHEFRMFGEE
YLKFRHFLIPNTFVHCKVTVQQGWIDKKTGKPRDPRLSFIQMQQLQDVMQHAAKNLTLEF
SLNEVLESKIQTLKEVLDKHTGEQFLYINIRDHEEKIALDMTSRMQKVSVNSELLDMLDN
LDITYKVG
NT seq
4347 nt
NT seq
+upstream
nt +downstream
nt
atgtacttaatttttgatactgaaactaccggtttacccaaacgatgggacgcacctata
accgacacagataactggccacgtgtagttcaaattgcatggcagttacatgatgaaatg
ggtaatcttattgaacatgaagattatttgatcaaacctgatggatttgacatcccatac
gattcagaacgtgtacatggaatatcgacacaactagcccaagagcaaggaatagcgctc
gaggaaatgctagaaaaattcaatattgccctatcaaaaacaaaatttgtggtaggtcaa
aacttgaattttgacttaatggttactggatcagagtttgtgcgagcacaaatagccaat
cagcttcaagaaattccagttctagatacctgtacagaacatactgcacagttatgtcaa
attccaggtggacgtggaggaaagtttaaacttcctacccttaccgaattacatgaattt
ttatttggagaaccatttagtgaagcacacaatgcaactgccgatgttgaggcaacaaca
cgatgcttccttgaactggttagaaaacaacagtacacaagggaacaactagatgttgaa
gaggattatttccttagattcaaacaaagcaacccatctactatcgctcctgtaggatta
aaacatgttaatctacaaaaagcaagtgctgcgcttaaaaaagatgaggagcctgtagta
tccaatcaagaaataaaagaaaatttagctgaattaagtgatgcgccctttgttcattta
cacaatcacagtcaattttctattctacaatcaacagctagtgtaaaagaccttgccgaa
gctgcagcagccaataacatgaccgctgttgcaatgactgatcatgcaaacatgatgggt
gcatttcattttgtgagagccattcaagcagtaaataaaacacttgcagatggtgaagag
gaacgtgagccgcttaaggccataataggttgtgaatttcaggtttgtgaaaacatgaat
gacaagtctattaaagacaatggatatcaaatcgttatccttgccaagaataaaaagggt
taccataaccttgcaaaacttgctagtaaagcctttaccgatggattttactacgtaccg
cgtatcgataaagaattattgcttcagtataaggatgacctaattgtgcttaccggtaac
ctatacggtgaggtcccttcaaaaattctgaatatcggtgaaaagcaggctgaagaagct
ctgctttggtggaaacaaaactttggcgatgacctttatattgagattatgaggcatggt
caagaggatgaaactagagcaaatcaagttttaattgcgctttcgcgaaagcatgatatc
aaaatagttgcaaccaataatacgtactacatccacaaagaagatgcaaacgctcacgat
atcttactttgtgtaagagatggagaaaaacaatctacacctataggacgtggacgtggt
tacaggtatggcttgccaaatgatcaatactattttaaaagctctgaagaaatgaaagag
ctttttaaagacctgccagatgctattcttaatatcaaggaagtaattgacaaaattgaa
ccctttgaacttgctcgtgatgtattattacctgcatttgatatacctgaacgatttata
gatcccgatgatgctactaagggaaccaaaaatggtgagaacgcctacttaagatttctt
acttatgaaggagctaaagagcgttatggagaagaattaactgacgacatcaaagaacga
ttagattttgaacttgatgttattgccaaaacgggttacccaggttactttcttattgtt
tgggattttattaaagcagcaagagatatgggcgttgccgttgggcctggacgtggtagt
gctgcaggtagtgctgttgcctattgtttaaaaattaccaatgttgatcccatacattat
gatttactttttgagcgtttcctaaatccagatcgtgtatcaatgccagatattgatatt
gattttgatgatgaaaatcgatataaggtaatggactatgtaattgagaaatatggttcc
aatcaagtagcccaaatcattacttacggtacgatggctgcaaaatcatccatacgagac
acggctagagcactagatctacccttaatggatgctgatagagttgcaaagctaattcct
gatttcgcaaagcttaaaaaaatgtttgctctcgaggaaaaagaaataggctctaaattt
agaggagaagacgctgacaacgtaagggaattgttgcagttatcagaaggaaatgacctt
actgcagacactatacaaaaagctagaattctagaaggttcagtacgtaatacaggtgtt
catgcttgtggtgtcataattactcctgacgatctaaccaattttgttcctgtagcaaca
gcaaaaaactcggatctatacgttactcaatttgataacgaggtagtagaaagcgctggt
ttgttaaaaatggacttcctagggcttaaaaccttatcccaaataaaagatacggtggcc
atcataaaggagcgacatggaattgatattgatattgaggccataccactagacgatcca
aagacctacgaattatttcaacgtggagaaaccacaggtatttttcaatatgaaagtgtg
ggaatgcaaaaatacatgagggaattgaagcctactcaattccctgatcttattgcaatg
aacgccctttatcgaccaggtcctttggagtatattccagaatttattgctcgtaaacat
ggtgataaagaaatcgtttatgacctagaagcgtgtgaggaatacctagcagaaacctat
ggaattacagtttatcaagagcaggtaatgctactgtcacaaaaactagctaatttctca
aaaggtgatgccgatgtcctgcgtaaagcaatgggtaaaaagcaaatggctacattgatg
aagatgaagcctaaatttttagatgctggagaaaaaaatggacacgatagagaagttcta
gaaaagatatggaaagattgggaagcatttgcctcttacgcatttaataaatcgcattcc
acctgctatgcctggattgcttatcaaacagcttacctcaaagcaaattatccagcagaa
tttatggcagcaacgctatccaataatatgaataatattaaggatgtgactaagtttatg
gatgagtgtagacgtatggggctggacgttttgggacccgatgttaatgaatctaattac
aagtttaccgtgaataaggaaggtgctgtacgatttggtatgggtgcggtaaaaggatta
ggtcatggcgctgtaatgacaattatagaaaaccgaaaagacggaccctacaaaagcatc
tttgatttaggtaaacgcatagacttaagagctgctaacaaaaaatcatttgaagcatta
gctctaagcggaggttttgacagcctaggtggagaaaatagagcattatactttcatgca
gcagataatggtcaaacatttcttgagcaagtaatcaagtatgctcaaaagtaccaagaa
aatgaaaacagcgctcaaatgagcatatttggggaagcaagtgaggtacaaataccagag
cctatgttgcccgtgtgcgaaagttggggcaccatggaaaaacttaaaagagaaaaagaa
gtagtaggtatttacatttctggacatccgcttgatgattataaaaaagagatgcaattt
ttttgcaactcaaatctaaatgcaatgaaagtgttacctgaattggtaggtaaagaactc
acctttgccggtgtaatttctagcgtaagtcacatgatgagtaaacaaaataaaccatgg
ggaatgtttaccctagaggattatgatgaatctcatgaatttagaatgtttggagaagaa
tatttaaaattcaggcacttccttatacctaacacatttgttcattgtaaagtcactgta
cagcaaggatggattgataaaaaaacgggaaagcctcgcgatcctaggttaagttttatt
caaatgcagcaactgcaagatgtgatgcagcacgcagcaaaaaatttaactttagaattt
agcttaaatgaggtgttagaatctaagattcaaaccttaaaggaagtattagacaagcac
acaggagaacaattcttgtatataaatattagagatcatgaagaaaaaattgcattagac
atgacctcaagaatgcaaaaagtaagcgtgaattcagaattattagacatgctagataat
ctagatatcacgtacaaggttggttaa
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integrated database retrieval system
