Neorickettsia sennetsu: NSE_0739
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Entry
NSE_0739 CDS
T00329
Symbol
virD4
Name
(GenBank) type IV secretion system protein VirD4
Organism
nse
Neorickettsia sennetsu
Pathway
nse03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
nse00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
NSE_0739 (virD4)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
T4SS-DNA_transf
TraG-D_C
TrwB_AAD_bind
DUF1641
Motif
Other DBs
NCBI-ProteinID:
ABD45644
UniProt:
Q2GD31
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Position
complement(658571..660496)
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AA seq
641 aa
AA seq
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MRQLRNIITIFFLLAFIFALALYMSAAIFVVAVWGIEHLNFRDLQPSLDGFPTRLWPTIF
VYISDLFNNWDAWAPAVKIKLAVSLGIPFGILGVVFYMLRAPIMEWRPFKKKESVHGDAR
WATEREIRKIGLRSRKGILLGKDKKGFLIAGGFQHALLFAPTGSGKGVGFVIPNLLFWED
SVVVHDIKLENFTLTSGYRKKMGQKVYCWSPADPDGKSHCYNPLDWVSSKPGQMVDDVQK
IANLLMPEQDFWVNEARSLFLGVVLYILAVPEKVKSFGEVVRVMRSDDVTYSLAVALDTM
GKKIHPVAYMNIAAFLQKADKERSGVISTMNSSLELWANPLIDTTTATSDFNFMKFKREL
TTVYVGLTPDNLTRLQPLMQVFYQQATEFLCRHLPQKDEPYGVLFMMDEFPTLGEMEQFK
TGIAYFRGYNVRLFLIIQDTEQLKGIYEEAGMNSFLSNSTYRITFAANNIETANLISQLV
GNKTVAQESLNKPKFLDLNPASRSLHISETQRALLLPQEVIMLPRDQQILLIESTYPIKS
KKIRYFEDSFFTKKILDPISIPTQEPFDPKKFEEKMRKEREAKELEENAPLAIDEDQALL
EDESLLDDSDYEDGDFEDLDEEEDLSDFLDDTDEENEENMV
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atgagacagcttaggaatattataacgatattttttcttctggcgttcatttttgccttg
gccctttacatgtcagcggctatttttgtggttgcagtttggggaatagaacacctcaat
ttccgtgatttgcaaccatctttggacgggtttcctacacgtctttggcctacaattttt
gtctatataagtgatcttttcaataattgggatgcttgggccccagctgtaaagataaaa
cttgctgtctcgttaggcattccgtttggaatactcggagtcgttttttatatgctccgt
gcaccgattatggagtggcgcccattcaagaagaaagaatctgtgcacggtgatgcaagg
tgggcaacagaaagggaaataaggaaaatcgggcttagaagtcgtaaagggatactgctt
ggtaaagataagaaaggtttcctcattgcaggggggtttcaacacgctttactgttcgct
ccaactggttctgggaagggtgttgggtttgttatcccaaatcttctcttctgggaagat
tctgttgttgttcacgatatcaaacttgagaacttcaccttaactagcggttataggaaa
aagatgggtcagaaggtctattgttggagtccagctgatccagatggtaaaagtcactgc
tataatccgttggattgggttagttcaaagccggggcagatggtagatgatgttcagaaa
atcgctaacctcctaatgcccgaacaagatttctgggtcaatgaagcccgaagtcttttt
ctgggggtagtactgtacattcttgcggtaccagaaaaggtaaagtcctttggagaggtg
gtaagggtgatgagaagcgatgatgttacgtatagtctcgctgttgcgttagatacaatg
ggtaaaaagattcacccagttgcctatatgaacattgctgcttttcttcaaaaggcagac
aaagaaagatctggtgtgatatcgacaatgaactcctcgctcgaattatgggcaaaccca
cttattgataccacgacggctactagtgactttaattttatgaagttcaaaagagaactt
acgacggtgtatgtgggcctcacaccagacaacttgacgagattacagccgcttatgcag
gttttttatcaacaagcaacagagtttttgtgtaggcatcttccacaaaaagacgaacca
tatggtgttttgtttatgatggacgagtttcctacccttggtgagatggagcagtttaaa
actggtattgcatattttcgtggatataacgtacgtctgtttcttatcatccaagataca
gagcagctaaaaggtatctacgaggaagcagggatgaactcttttctctcgaactctacc
tacagaattacttttgctgcaaacaacatagaaacggcaaatttaatttcgcagttggtt
ggtaataagacagttgcacaggaatcgcttaacaaaccgaagtttcttgacttgaatcct
gcatcgaggtcgctgcatatttccgagactcagcgtgcgcttctgttgcctcaggaggtg
ataatgttgccgcgtgaccagcagatcctattgattgaatctacttatcctatcaaatca
aaaaagatacggtatttcgaagatagttttttcacgaaaaaaatcctcgatcctatttct
atcccgacccaggaaccatttgatcccaaaaaatttgaagaaaagatgcgtaaggaaagg
gaggctaaggaattagaagagaatgctccattggctatagatgaagatcaagcgcttctt
gaagacgagtctcttttggatgattccgattatgaagatggagactttgaggatctagat
gaagaagaggatctgtccgattttttagatgacacggacgaagagaacgaagaaaacatg
gtatga
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