Neisseria subflava: FAH66_01875
Help
Entry
FAH66_01875 CDS
T06236
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
nsf
Neisseria subflava
Pathway
nsf03410
Base excision repair
nsf03430
Mismatch repair
nsf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nsf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FAH66_01875 (recJ)
03430 Mismatch repair
FAH66_01875 (recJ)
03440 Homologous recombination
FAH66_01875 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nsf03400
]
FAH66_01875 (recJ)
DNA repair and recombination proteins [BR:
nsf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
FAH66_01875 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
FAH66_01875 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
FAH66_01875 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
DHHA1
RecJ_OB
Glyco_transf_4
PagL
Motif
Other DBs
NCBI-ProteinID:
QCL70365
LinkDB
All DBs
Position
382142..383842
Genome browser
AA seq
566 aa
AA seq
DB search
MSVKIQTRSINPTVFNDLLTAGTDPLIARLCAARDVQSPAELDDKLAALLPYQTLTNCEA
AAGRLADAIERQEKILIVADYDADGATACSVGMSGLAAMGAKVDFLVPNRFEHGYGLTPE
LAEIAAEQGVDLLVTVDNGIASIAGVARAQELGLDVIVTDHHLPAETVPDCIIVNPNQKG
CGFQSKSLAGVGVIFYVLMALRAELRRRHYFSDGLKEPNLGDLLDLVALGTVADVVTLDH
NNRILVSQGLKRMRLGKMRPGIRALFEVARRDWRKAQPFDMGFALGPRINAAGRLDDMSV
GIACLLAQDDAEAQELAAQLNNLNIERREIEQSMLQDALNAFPETLPPGQTTLVAYRDDF
HQGVVGIVASRLKDRFYRPTIVFAPADNGEVRGSGRSIPNLHLRDALDLVSKRHPDLILK
FGGHAMAAGLSILEDNIPAFQTAFEEAVREMVCEDDLSQTFITDGSLPARDITLEQAQNL
ARHVWGQGFTPPSFTDEFHVIRQQPLGAEGKHKKVWLQKDGYEFEAMFWRCSEDIPEYIR
TVYRPVANEWRNNLELQLYIDYWEAA
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtcaaaatccaaacacgttctattaatccgactgtttttaacgacttgcttact
gccggtaccgatcctttgattgcgcggctgtgtgctgcgcgtgatgtgcaaagtccggcc
gagttggacgacaaacttgctgcgctgttgccgtatcaaacgctgacaaactgcgaagcc
gccgccggccgtttggcggatgcgattgagcgtcaggaaaaaatcttgattgtcgccgac
tacgatgcagacggtgcgacggcgtgttccgtcggtatgagcggtttggcggcgatgggg
gcgaaagtggatttccttgtgcccaatcgctttgaacacggctacggcttaacgcccgag
ctggctgaaatcgcggcagagcaaggtgtggatttattggtgacggtggataacggtatc
gccagcattgcaggcgtggcgcgtgcgcaggagttgggtttggatgtgattgtgaccgac
caccatctgcctgccgagaccgtgcccgactgcatcatcgtcaatccgaatcaaaaaggc
tgcggtttccaaagcaaaagcttggcgggcgtgggcgtgattttttatgtattgatggct
ttgcgtgccgaactgcgccgccgccattatttttcagacggcctgaaagagccgaatctg
ggcgatcttttggatttggtcgcactcggtaccgtcgccgatgttgtcactctagaccac
aacaaccgtatcctcgtgtctcaaggtttgaaacggatgcgtttgggcaaaatgcgcccc
ggtatccgcgccttgtttgaagtggcgcgacgggattggcgcaaggctcagccgtttgat
atgggctttgcgttgggaccgcgcatcaatgcggccggacggctggacgatatgtcggtc
ggcattgcctgtctgttggcgcaagatgatgccgaagcgcaggaactggcggctcagtta
aacaacctcaatatcgagcgccgcgaaatcgagcaatccatgctacaagacgcgctgaac
gcctttcccgaaaccctacctccaggtcagacgactttggtggcgtatcgcgacgatttc
catcaaggcgtggtcggcatcgttgccagccgcctcaaagaccgtttttatcgtccgacc
atcgtgtttgcgcctgccgacaacggcgaagtgcgcggttcgggacgctccattcccaat
ctgcacctgcgcgatgctttggacttggtgtctaaacgtcatcccgatttgattttgaaa
ttcggcggacacgcgatggcggcgggtttgagcatacttgaagacaatattcccgcgttt
cagacggcctttgaagaagcagtgcgcgagatggtgtgcgaagacgatttgtcgcaaacc
ttcatcaccgacggcagcctgcctgcccgcgacattacgctggaacaggcgcagaacctt
gcccgacacgtttgggggcagggcttcacgccgccgagttttaccgacgaatttcacgtc
atccgccagcagcctttgggcgcggaaggcaaacataaaaaagtctggctgcaaaaagac
ggctacgaatttgaagccatgttttggcgttgcagtgaagacattcccgaatacatccgc
acggtgtaccgccccgttgccaacgaatggcggaataatctcgaattgcagctttatatc
gactactgggaagccgcgtaa
DBGET
integrated database retrieval system
