Neisseria subflava: FAH66_06070
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Entry
FAH66_06070 CDS
T06236
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
nsf
Neisseria subflava
Pathway
nsf03030
DNA replication
nsf03430
Mismatch repair
nsf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nsf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FAH66_06070
03430 Mismatch repair
FAH66_06070
03440 Homologous recombination
FAH66_06070
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nsf03032
]
FAH66_06070
03400 DNA repair and recombination proteins [BR:
nsf03400
]
FAH66_06070
Enzymes [BR:
nsf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FAH66_06070
DNA replication proteins [BR:
nsf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FAH66_06070
DNA repair and recombination proteins [BR:
nsf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FAH66_06070
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
QCL71087
LinkDB
All DBs
Position
1248863..1250254
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AA seq
463 aa
AA seq
DB search
MSDFARWPLLSEAFSRLGRPVVVVDLETTGGNFYQDRITEVALVRFEQGRATHYEQLVNP
CRSIPEFVARLTGIHDETVKNAPVFANIAADLLPLLQGAVVVAHNSRFDYTFLRHEFARI
HTDFAAPSLCTVQLSRRLYPEFYKHSLDSIIERTGIQTANRHRAMTDVAALCDYLELSLA
EKNHQQWDEHVRVLMNPKMLPTWLPDSLAQQLYALPDSYGVLVWFDHFGKAQAIEAHERA
YSETATLLHSKKLPPHIKAAASIRFIPAVGQLHTLWLKAQTMQEYQLMPSEKSTSFSTVR
FIADEHGSLQARIVLLNSGTKNWRPYGLFAHKKAAKRALMQWSQEHRLCPDSLNILPTSY
AKGEPCPVEAVGKCNGNCRQLNGIKHQNQRITELAALLPVTDWGKAHEIEITETDPLTGN
SITLLCAGGALALPDGGWYFDSSLPLVIKNKFRQDKENIRLIA
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgtcagatttcgcacgctggccgctcttatccgaagcattttcccgtttaggacggcct
gtggtcgtggtggatttggagacgaccggtggaaatttctatcaggacaggataacggaa
gtcgcccttgttcgttttgagcaaggacgcgccacacattacgagcaattggtcaatcct
tgccgcagcattcccgaattcgttgccagactgaccgggattcatgatgaaacggtgaaa
aacgcgcctgtctttgccaatattgcagccgatttgttgccgctgttgcaaggggcagta
gttgttgcccacaacagccgctttgactacaccttcctgcgccacgagtttgcccgtatc
catactgactttgccgcaccctcgctctgtacggtgcagctgtctcgccgtctctatcct
gagttttacaaacacagcctcgacagcattatcgaacgcaccggcattcagacggccaac
cgccaccgcgccatgaccgatgttgccgcattgtgtgattatctcgaattaagtctggca
gaaaaaaatcatcaacaatgggacgaacatgtccgagtattgatgaatccgaaaatgcta
cccacttggctgcctgattcgctcgcacaacagctctatgccctgcccgacagttacggc
gtattggtttggtttgaccatttcggcaaagcccaagccattgaagcacacgaacgcgca
tacagtgaaaccgccaccctgctgcacagcaaaaaactaccgccgcacattaaagccgca
gcctccatccgttttattccggcagtcggacagctccatacattatggctcaaagcccag
accatgcaggaataccaactgatgccgtctgaaaagtccacatcgttttctaccgtccgc
tttatcgctgacgaacacggcagccttcaagcacgcatcgtcttgttaaacagcggcacc
aaaaattggcgcccttacggtttgtttgcccataaaaaagcagccaaacgcgctttgatg
caatggtcgcaagaacacagactctgcccagattcgctcaacattttgccgaccagctac
gcaaaaggcgaaccctgccctgtcgaggccgtcggaaaatgcaatggcaactgccgccag
ctaaacggtatcaaacatcaaaaccaacgcattaccgagcttgccgccctactccccgta
accgattggggcaaagcgcacgaaattgaaattaccgaaaccgatcccctgaccggaaac
agcattaccctgctctgcgccggcggcgcgttggcattgcctgatggcggctggtatttc
gacagcagcctgcctctcgtgattaaaaacaaattcaggcaagacaaagaaaatatccgt
ttgattgcttaa
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