Neisseria subflava: FAH66_07180
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Entry
FAH66_07180 CDS
T06236
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
nsf
Neisseria subflava
Pathway
nsf02020
Two-component system
nsf02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
nsf00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
FAH66_07180 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
FAH66_07180 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nsf03021
]
FAH66_07180 (rpoN)
Transcription machinery [BR:
nsf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
FAH66_07180 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
CEP76_N
Motif
Other DBs
NCBI-ProteinID:
QCL71273
LinkDB
All DBs
Position
complement(1489592..1490947)
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AA seq
451 aa
AA seq
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MSSLVLKLKQTQQLNQRLQQSLRILQMSGLELEREVEDWLLDNPLLERPETEEFADSGLN
RAVTMPRAGQQLSGDDAEDIWSNIAEEEDFKRYLHAQVCEHPLSQVEAAYVHVLIDFLDE
QGYLTDSLEEIIDHTPLEWMLEEEALQNALDVLQTFDPPGVAAADLTESLMLQLMRLPAS
PARQMAAHLVQSSLQDLGKNRKQNVLRFRKLYPDTDSETIEAAFDMIAELNPYPAYGFAS
ATPTPYIQPDVWVKEGKDGWEVISNEAAWPKLRLNQEYCDLMKSAEEGAPEWKEKINEAK
QRIDSLELRKSTVLRLTEYIVKNQEDFFIFGEIGLSPMLMKDAAAELGLAESTISRAANQ
KYLSCPRGLFALRYFFTQAVNADDDGEGFSQGAIKAVLSQLIESEDSSKPYSDETLVKLL
KQRGIEIARRTVAKYRESLDIPPAHKRKFTE
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcactcgtccttaaactcaaacagacccagcagctcaaccagcggctgcagcag
tctttgcgcatcttgcagatgtcgggtcttgagcttgagcgcgaagtggaagactggttg
ttagacaatcctctgcttgagcgtccggaaaccgaagagtttgccgatagcgggctcaac
cgtgccgttaccatgccgcgtgcaggtcagcagttgagcggcgacgatgccgaagatatt
tggagcaacatcgctgaagaagaggatttcaaacgctatctgcatgcccaagtgtgcgag
catccgctctcgcaagtggaagcggcttatgttcacgtcttgattgattttttggacgaa
caaggctacctcaccgacagtctcgaagaaattatcgatcacacgccgttagaatggatg
ctggaagaagaggccctgcaaaatgcgttagatgtattgcaaacctttgatccccccggc
gtggcggcggcggatttgaccgagtcgctcatgctgcagttaatgcgtttgccggcttct
cctgcccgacaaatggccgcgcatttggtgcaaagttcgcttcaagacttaggcaaaaac
cgcaaacaaaatgttctgcgtttccgcaaactctatcccgataccgacagcgaaaccata
gaagccgcgttcgatatgattgccgagctcaatccctatccggcctacggtttcgcctct
gccacgcccacgccttatattcagcctgacgtttgggtcaaagagggcaaggatggctgg
gaagtcatcagcaacgaggcggcttggccgaagttgcggcttaatcaggaatattgcgac
ctgatgaaatcagcggaagagggtgcaccggagtggaaggaaaaaattaacgaagccaag
cagcgtattgattctttggagctgcgtaaaagcacggtcctccgccttaccgagtatatc
gtcaaaaatcaggaagattttttcatcttcggagaaatcggcctgtcgccaatgctgatg
aaagatgccgctgccgaattgggtttggcggaaagtaccatctcgcgcgccgccaatcag
aaatatttgtcttgcccgcgcggcctgtttgcgttacgctatttcttcacacaggcagtg
aatgctgatgatgacggcgaagggttcagccaaggagcaatcaaagccgtattgagccag
ctgattgaaagtgaagacagcagcaaaccttattcggacgagaccctcgtcaaattatta
aaacaacgcggcattgaaatcgccagacgtacagttgcaaaatatagagaatcattagac
ataccaccggcacacaaacgaaaatttaccgagtag
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