Neisseria subflava: FAH66_08895
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Entry
FAH66_08895 CDS
T06236
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
nsf
Neisseria subflava
Brite
KEGG Orthology (KO) [BR:
nsf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nsf03032
]
FAH66_08895 (topA)
03400 DNA repair and recombination proteins [BR:
nsf03400
]
FAH66_08895 (topA)
Enzymes [BR:
nsf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
FAH66_08895 (topA)
DNA replication proteins [BR:
nsf03032
]
Prokaryotic type
DNA Topoisomerases
FAH66_08895 (topA)
DNA repair and recombination proteins [BR:
nsf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
FAH66_08895 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Toprim_4
Lar_restr_allev
Motif
Other DBs
NCBI-ProteinID:
QCL71575
LinkDB
All DBs
Position
complement(1814949..1817255)
Genome browser
AA seq
768 aa
AA seq
DB search
MAKNLLIVESPSKAKTLKKYLGGDFEILASYGHVRDLVPKSGAVDPDNGFAMKYQLISRN
SKHVDAIVAGAKEAENIYLATDPDREGEAISWHLFEILKSKRGLKNIKPQRVVFHEITKN
AVLDAVAHPREIEMDLVDAQQARRALDYLVGFNLSPLLWKKIRRGLSAGRVQSPALRLIC
ERENEIRAFEAQEYWTVHLDSHKGRSKFTAKLAQYNGAKLEQFDLPNEAAQADVLKELEG
KEAVVTAIEKKKRSRNPAAPFTTSTMQQDAVRKLGFTTDRTMRTAQQLYEGIDVGQGAIG
LITYMRTDSVNLADEALTEIRHYIENKIGKEYLPSAAKQYKTKSKNAQEAHEAIRPTSVY
RTPESVKPFLSADQFKLYQMIWQRTVACQMTPAKFDQTTVDITVGKGVFRVTGQVQTFAG
FLSVYEESSDDEEGEDSKKLPEMSEGDKLPVDKLYGEQHFTTPPPRYNEATLVKALEEYG
IGRPSTYASIISTLKDREYVTLEQKRFMPTDTGDIVNKFLTEHFAQYVDYHFTAKLEDQL
DEIANGKRRWIPVMDKFWKPFIKQVEEKEGIERAKFTTQELDETCPKCGEHKLQIKFGKM
GRFVACAGYPECSYTRNVNETAEEAAERIAKAEAEQAELDGRECPKCGGRLVYKYSRTGS
KFIGCANYPKCKHVEPLEKPKDTGVQCPQCKKGNLVERKSRYGKLFYSCSTYPDCNYATW
NPPVAETCPKCAWPVLTIKTTKRWGVEKVCPQKECGWKEQIEPPVPKE
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaaaacctattaatcgtcgaatccccgtccaaagccaaaaccctgaaaaaatat
ctgggcggtgattttgaaatcttggcgtcttacggccacgtccgcgatttggttccgaaa
agcggagcagtcgatcccgacaatggctttgccatgaaataccaattgatcagccgcaac
agcaaacacgtcgatgccatcgttgccggagccaaagaagccgaaaacatctacctcgca
accgacccggatagggaaggcgaagcgatttcctggcatctttttgaaatcctcaaatcc
aaacgcggcctgaaaaacatcaagccgcagcgtgtcgtgttccatgaaattaccaaaaac
gccgtgctcgatgccgttgcccatccgcgcgaaattgaaatggacttggttgatgcgcaa
caagcccgtcgcgctttggactatctggtcggtttcaacctttcgccgttgctgtggaaa
aaaatccgccgcggtttgagcgcgggtcgtgtgcaaagtcccgccttgcgtctgatttgc
gaacgcgaaaacgagatccgcgcgtttgaagcgcaggaatattggacagtgcatctcgac
agccacaaaggccgcagcaagttcaccgccaaactcgcccaatacaacggcgcgaaactc
gaacaattcgacctgccgaacgaagccgcgcaagctgatgtgttgaaagaactcgaaggc
aaagaagccgtcgttaccgccatcgaaaagaaaaagcgcagccgcaaccccgccgcgccg
ttcaccacttctaccatgcagcaggatgccgtgcgcaaactcggcttcaccaccgaccgc
accatgcgtaccgcccagcagctttacgaaggtatagacgtagggcagggcgctatcggt
ctgattacctatatgcgtaccgacagcgtgaacttggccgatgaagcgttaaccgaaatc
cgccattacattgaaaataaaatcggcaaagaatatctgccgagtgccgccaaacaatac
aaaaccaaatccaaaaacgcccaagaagcgcacgaagccatccgtccgacttccgtgtac
cgcacgcccgaaagcgtcaaacccttcctgagcgcagaccagttcaaactctatcaaatg
atttggcagcgcaccgttgcctgtcagatgacgcccgccaaattcgaccaaaccaccgtc
gatattaccgtcggcaaaggcgtgttccgcgtaaccggacaagtacaaaccttcgcgggt
ttcctcagcgtttacgaagaaagcagcgacgatgaagaaggcgaagacagcaaaaaactg
cccgaaatgagcgaaggcgacaaattgcccgtggacaaactctacggcgaacaacacttc
accactccgcctccacgctacaacgaagccacactggttaaagccctcgaagaatacggc
atcggccgcccttcgacctacgccagcatcatctctacgctcaaagaccgcgaatacgtt
acccttgagcaaaaacgcttcatgcccaccgacacaggcgacatcgtcaataaattcttg
accgaacacttcgcccaatatgtcgattaccacttcaccgccaaacttgaagaccagctt
gacgaaattgccaacggcaaacgccgttggattcccgtgatggacaaattctggaaaccg
ttcatcaaacaagtggaagaaaaagagggcatcgaacgcgccaaatttaccacgcaggaa
ctcgacgaaacctgtccgaaatgcggcgaacacaaactgcaaatcaaattcggcaaaatg
ggtcgtttcgtcgcgtgtgccggttatcccgagtgcagctacacgcgcaatgtcaacgaa
actgcagaagaagctgccgaacgcattgccaaagcggaagcagaacaagccgaactcgac
gggcgcgaatgccctaaatgcggcggtcgcctagtgtacaaatacagccgcaccggcagc
aaattcatcggctgcgccaactatccgaaatgcaaacacgttgaaccgctggaaaaaccg
aaagacaccggcgtccaatgcccgcaatgcaaaaaaggcaacctcgtcgagcgcaaatcc
cgttacggcaaactgttttacagttgcagcacctatccggattgcaactacgccacttgg
aatccacctgttgcagaaacctgtccgaaatgcgcgtggccggttttgaccatcaaaacc
accaaacgctggggtgtggaaaaagtctgcccgcaaaaagaatgcggctggaaagagcaa
attgaaccgcctgtaccgaaggaataa
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