Neisseria subflava: FAH66_09415
Help
Entry
FAH66_09415 CDS
T06236
Name
(GenBank) RNB domain-containing ribonuclease
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
nsf
Neisseria subflava
Brite
KEGG Orthology (KO) [BR:
nsf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nsf03016
]
FAH66_09415
Enzymes [BR:
nsf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
FAH66_09415
Transfer RNA biogenesis [BR:
nsf03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
FAH66_09415
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
Motif
Other DBs
NCBI-ProteinID:
QCL71663
LinkDB
All DBs
Position
complement(1921983..1923839)
Genome browser
AA seq
618 aa
AA seq
DB search
MNIFYEESGQFKVASIVQKNDATYQVDTQHGKRTKVKANNVFAEFDGDMAAFLENAQAQA
ADIDTDLLWEVCGEEEFTAEAIAEEYYGHAPTKTELAATLIALYAAPMYFYKKAKGVFKA
APEETLKQALAAIKRKKQQDAQIDAWAEALKHGEMPSEIAADLKTILHAPDKQSLTYKAF
TKAADELKISAYELAKKTGGITSIPQYLQDGFEIKYFPKGTGFPDLPLPEMPDLPKADVT
AFSIDDESTTEVDDALSLTDLGNGKKRVGIHIAAPSLAIKPGDKMEKNIMERLSTVYFPG
GKITMLPENWIAAFSLDAGAYRPSISIYFDVDSEFNVGAPTCKIEAVNIAENLRIQTIEP
HFNAETGLDEAGEMMFAHHQDLIWFYQFAIALQKARGKYEPDRAPQYDYSIELDEEGNVS
VVRRERGSPIDTLVSEMMILANSTWAQMLDENELPGLFRVQPAGKVRMSTKSEPHIGMGV
QHYGWFTSPLRRAADYINQKQLISLIDDTAEPLYQNSDAELFAALRDFDAAYTAYADFQR
QMEAYWSLVYLQQQGTSELTATILKEDLVRIEGLPLVTRATGIPFDALPKSQALFKITEL
DAEKQFIALNYQKAVLPG
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atgaatatcttttacgaagagtccggccaattcaaagttgcctccatcgtccaaaaaaac
gacgctacctaccaagtcgatacccaacacggcaagcgcaccaaagtgaaggcaaacaat
gtctttgccgagtttgacggcgatatggcggcatttttggagaacgcgcaagcacaggcg
gcggacatcgacaccgatttattgtgggaagtatgcggcgaagaagaatttaccgccgaa
gccatcgccgaagaatattacggccatgcgccgaccaaaaccgagctggcggcaacttta
attgcgctttacgccgcgccgatgtatttctacaaaaaagccaaaggcgtgttcaaagcc
gcgcccgaagaaactttgaaacaggcgcttgccgccatcaaacgcaaaaaacagcaagac
gcgcaaatcgacgcttgggcggaagccttgaaacacggcgagatgccgtctgaaatcgcg
gcggatttgaaaaccatcttacacgcgcccgacaagcagtcactgacttacaaagccttt
accaaagccgccgacgagctgaaaatctccgcctacgaactggcgaaaaaaacgggcggc
attacgtccattccccaatacctacaagacgggtttgaaatcaaatacttccccaaagga
acaggcttccccgaccttccgcttcctgaaatgcccgacttgcccaaggctgacgttacc
gccttttccattgacgacgaatcgaccaccgaagtggacgatgccttgagcctgaccgac
ttgggcaacggcaagaagcgcgtcggcatccacatcgccgcgccgtcgcttgccattaaa
ccaggcgacaaaatggaaaaaaacatcatggaacgcttgagtacggtctattttcccggc
ggcaaaatcaccatgctgcctgaaaactggattgccgcgttcagccttgatgcgggtgca
taccgcccttccatcagcatttatttcgatgtggacagcgagttcaacgtcggcgcgcca
acctgcaaaatcgaagcggtcaacatcgctgaaaacctgcgcattcaaaccatcgagccg
catttcaacgccgaaaccggcttggacgaagcgggcgaaatgatgttcgcccaccatcaa
gacctgatttggttctatcaatttgccatcgccctgcaaaaagcacgcggcaaatacgaa
cccgaccgtgcgccgcaatacgattacagcatcgaattggatgaggaaggcaacgtatcc
gtcgtccgccgcgaacgcggttcgcccatcgatacgctggtcagcgaaatgatgattctt
gccaacagcacttgggcgcaaatgctggacgaaaacgagctgcccggccttttccgcgtc
caaccggcaggcaaagtgcgcatgagcaccaaatccgagccacacatcggcatgggtgtg
cagcattatggctggtttacctcgccgctgcgccgcgccgccgactacatcaaccaaaaa
cagctgatcagcctgatagatgatactgccgagccgctgtatcaaaacagcgatgccgag
cttttcgccgcgctgcgcgactttgatgccgcctatacagcctacgccgacttccaacgc
caaatggaagcctactggagcctcgtctatctgcaacagcaaggcacgagcgagctgacg
gccaccatcctcaaagaagacctcgtccgcattgaaggcctgccgctggtaacgcgcgcg
accggtattccgtttgacgcgctgcctaaatcgcaggcattgttcaaaatcactgaattg
gatgccgagaagcagtttatcgcgctcaactatcaaaaagccgttttaccgggctga
DBGET
integrated database retrieval system
