Neisseria subflava: FAH66_10375
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Entry
FAH66_10375 CDS
T06236
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
nsf
Neisseria subflava
Pathway
nsf03030
DNA replication
nsf03430
Mismatch repair
nsf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nsf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FAH66_10375 (dnaE)
03430 Mismatch repair
FAH66_10375 (dnaE)
03440 Homologous recombination
FAH66_10375 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nsf03032
]
FAH66_10375 (dnaE)
03400 DNA repair and recombination proteins [BR:
nsf03400
]
FAH66_10375 (dnaE)
Enzymes [BR:
nsf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FAH66_10375 (dnaE)
DNA replication proteins [BR:
nsf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FAH66_10375 (dnaE)
DNA repair and recombination proteins [BR:
nsf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FAH66_10375 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
Motif
Other DBs
NCBI-ProteinID:
QCL71836
LinkDB
All DBs
Position
complement(2118424..2121858)
Genome browser
AA seq
1144 aa
AA seq
DB search
MTEPTYIPLRLHTEFSITDGMVRIKKLIAKAQEYGLPALGISDLMNEFGLVKFYKACRGA
GIKPIGAADVWIGNPNAPDKPFRAMLIIRNDAGYLRLSELLTEAYVGKDRNIHHAELNPE
WLENGDNSGLICLSGAHYGEVGVNLLNGNEDAARAAALKYAAWFPDAFYLELQRLPERPE
WEACVSGSVKLAEELGLPVVATHPTQFMSSDDFNAHEARVCIAGGWVLTDKKRPRDFTPS
QFFIPPETMAERFADLPEALENTVEIAKRCNLHITLGKNFLPLFPTPDGLSLDDYLVKLS
NEGLQERMVQLYPDEAERAAKMPEYQERLDFELNIIIQMKFPGYFLIVQDFINWAKTHGC
PVGPGRGSGAGSLVAYSLKITDLDPLKYALLFERFLNPERVSMPDFDVDFCQANRGRVIE
YVREKYGAEAVSQIVTFGTMSSKAVIRDVGRVLELPFTLCDKLSKLIPLEANKPLGLDDA
MKAEPQIQELIEAEEADELITLAKKLEDLTRGLGMHAGGVLIAPGKISDYSPVYQADESA
SPVSMYDKGDVEDVGLVKFDFLGLRNLTIIEMAQNNIKNTTGDIVDVGTIPLDDQAAYKI
FRDANTTAVFQFESTGMKKMLKTAHTTKFEELIAFVSLYRPGPMDNIPDFVARMKGQEFQ
YIHPLLEGILAPTYGIMVYQEQVMQAAQIIGGYSLGGADLLRRAMGKKKPEEMVKHREIF
AEGAAKQGISREKSDEIFNYMEKFAGYGFNKSHAAAYALISYQTAWLKAHYPAEFMAATM
SSELDNTDQLKHFYDDCRANGIEFLPPDINESDYRFTPYPNMKIRYALGAIKGTGEAAVE
SIIAARQSGGKFTGLLDFCERVGKEHMNRRTLEALIRGGAFDSIEPNRAMLLANIDLAMN
NADQKAANANQGGLFDMMEDAIEPVQLVDAPMWSESEKLAEEKTVIGFYLSGHPFGPYAQ
EVRQIAPTKLGRLKPQDSVRLAGFVTAVRTMMGKRGKIAFVSLEDLSGLVEIMVSGHTLE
NCADYLKSDQVLIIESKVSRDDYGGGDGLRIMANQVMTLQMARERYARSLSLALAPGHDI
ARLAAILTAHRLPDTSHIPLQLSYSNGKASGKLKIAPKWMVTPSTALFDELETLLGSRAV
RVNW
NT seq
3435 nt
NT seq
+upstream
nt +downstream
nt
atgaccgagccgacctacatccccctgcgcctgcataccgaattctcgattaccgacggt
atggtgcggattaaaaaactgattgccaaagcgcaggaatacggtttgcctgctttgggc
atcagcgatttgatgaacgaattcggtttggtgaaattctataaagcctgccgcggtgca
ggaattaagcccatcggcgcggcggacgtgtggataggcaatccgaatgcgcccgacaag
ccgtttcgtgccatgctgattatccgcaacgacgcgggctatctgcgcttgagcgagctt
ttgacggaggcctatgtcggcaaagaccgcaatatccatcatgcggaactcaatcccgaa
tggctggaaaacggcgacaacagcggcttgatttgtttgagtggcgcgcattacggcgaa
gtaggcgtgaatctgttgaacggcaatgaagacgcggcgcgtgcagcggcgttgaaatat
gcggcgtggtttcccgatgcgttttatttagagctgcaacgcctgcccgaacgcccagaa
tgggaggcttgcgtttctggcagcgtgaagctggcggaggaattgggcttaccggtagtg
gcaacgcatccaacacagtttatgagcagcgatgatttcaacgcgcacgaggcgcgtgtg
tgcatcgctggcggctgggtgctgacggacaaaaaacgtccgcgcgatttcacgccgagc
caatttttcattccgccggaaaccatggcagaacgtttcgccgatttgcccgaagccttg
gaaaacacggtagaaatcgccaaacgctgtaatctgcacatcacattgggcaaaaacttc
ctgccgctcttccctactccagacggcctatcgctggatgattatttggtgaaactctcc
aacgagggcttgcaggaacgcatggttcagctttatcccgacgaggcggaacgtgcggca
aaaatgccggaatatcaggaacgtttggattttgagttaaacatcatcatccagatgaaa
ttccccggctatttccttatcgtacaagactttatcaactgggcgaaaacacatggctgt
ccggtagggccgggacgcggttcgggtgcaggttcgctggtggcgtattcattgaagatt
accgaccttgatccgctcaaatacgcgttgctgtttgaacgtttcttgaaccctgaacgc
gtctccatgcccgacttcgacgtggacttctgtcaggcaaaccgcgggcgcgtgattgaa
tatgtgcgcgaaaaatacggcgcggaggcggtaagccagattgttactttcggcacgatg
tcgtccaaagcggtgattcgcgacgtggggcgcgtgctggagctgccgtttaccctgtgc
gacaaactgtctaagcttattccgctggaagccaacaaacctctgggtttggacgacgcg
atgaaggcggagccgcaaattcaggaattgatcgaagcggaagaagcggacgaactgatt
acgctggcgaaaaagctggaagacctgacgcgcggtctgggtatgcacgcaggcggcgtg
ttgattgcgccgggcaagatttccgattacagccccgtgtatcaggcggacgagtccgcc
tcgcccgtatccatgtacgacaaaggcgacgtagaagacgtgggtttggtgaagttcgac
tttttgggtctgcgcaacctgaccattatcgaaatggcgcagaacaacatcaaaaacacc
accggcgatattgtcgatgtcggcacaatcccgctcgacgaccaagccgcctacaaaatc
ttccgcgatgcgaacaccaccgccgtattccagttcgagtcgaccggcatgaaaaaaatg
ctgaaaacggcgcacaccaccaagtttgaagaactcatcgccttcgtatcgctctaccga
cccggcccgatggacaatattcccgacttcgtcgcgcgtatgaagggtcaggaattccaa
tacatccacccgctgctcgaaggcatcctcgcgccgacctacggcattatggtgtatcag
gaacaagtgatgcaggcggcgcagattatcggcggctactcgctcggcggcgcggacttg
ctgcgccgcgccatgggtaagaaaaagcccgaagaaatggtgaaacaccgtgaaatcttc
gccgaaggcgcggcaaagcaaggcatttcgcgcgaaaaatccgacgaaatcttcaactac
atggaaaaattcgccggctacggtttcaacaaatcccacgccgccgcctacgccctgatt
tcctaccagaccgcatggctcaaagcccattaccccgccgaatttatggcggcaaccatg
tcgtctgaattggacaacaccgaccagctcaagcatttctacgacgactgccgcgccaac
ggcatcgagttcctaccgcccgacatcaacgaatccgactaccgcttcacgccgtatccg
aacatgaaaatccgctacgcactcggcgcgattaaaggcacgggcgaagccgccgtcgaa
tccatcatcgccgcgcggcaaagcggcggcaagtttaccggcctcttggacttctgcgag
cgcgttggcaaagaacacatgaaccgccgcaccctcgaagccctgatacgcggcggcgcg
ttcgacagcatcgaacccaaccgcgccatgctcttggcgaacatcgacctcgccatgaac
aacgccgaccaaaaagccgccaacgccaatcagggcgggcttttcgacatgatggaagac
gccatcgagccggtgcagctcgtcgatgcgcccatgtggagcgaatcggaaaaactcgcc
gaagaaaaaaccgtcatcggcttctacctctccggccacccgttcggcccgtatgcccaa
gaagtccgccaaatcgccccgaccaaattaggtcgtctgaaaccgcaagacagcgtgcgc
ctcgccggattcgttaccgccgtgcgcaccatgatgggcaaacgcggcaaaatcgccttc
gtcagccttgaagatttgagcggactggtggaaatcatggtcagcggccacacgctggaa
aactgcgccgactacctcaaatccgaccaagtgctgattatcgaatccaaagttagccgc
gacgactacggcggcggcgacgggttgcgcatcatggccaaccaagtcatgaccctgcaa
atggcgcgcgaacgctacgcccgcagtctcagcctcgccctcgcacccggccacgacatc
gcacgcctcgccgccatcctcaccgcacaccgcctgcccgacacgtcgcacatcccgctg
caactgtcgtacagcaacggcaaagcatcgggcaaattgaaaattgcgccaaaatggatg
gtaacgccaagcaccgccttgtttgacgaactggaaacattgctcggcagtagggctgtt
cgtgtaaattggtaa
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