Neisseria shayeganii: H3L94_01510
Help
Entry
H3L94_01510 CDS
T07084
Symbol
rlmD
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
nsg
Neisseria shayeganii
Brite
KEGG Orthology (KO) [BR:
nsg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
nsg03009
]
H3L94_01510 (rlmD)
Enzymes [BR:
nsg01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
H3L94_01510 (rlmD)
Ribosome biogenesis [BR:
nsg03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
H3L94_01510 (rlmD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
TRAM
Methyltransf_31
MTS
Methyltransf_25
Methyltrans_SAM
TRM5-TYW2_MTfase
Methyltransf_15
Methyltransf_23
Methyltr_RsmB-F
Cons_hypoth95
Motif
Other DBs
NCBI-ProteinID:
QMT40766
UniProt:
A0A7D7S5C9
LinkDB
All DBs
Position
326036..327328
Genome browser
AA seq
430 aa
AA seq
DB search
MNIATIQGIDHEGRGIARVDGKAVFIEGALPQETVSYRLTRSKKHFDEAEMLAVLQPSPH
RISPRCRHYRTCGGCSWQHVRSDVQVAYKQRILEEQLQRLANIQPQQYLPAIYGRSWGYR
QRARLSVAHPAGGKAVFGFQSRHSHRIVDIQECPVLSPPLAEQLASVRCLLNEVAGADIG
AVELHQGEEACALTLHGRRFPPPVLAVLRKQAAAWSRQGWQLYLQTGRQAEPLLPAEAGL
FYRLPEYGLTLPYRPGDFTQINADTNALMVRRALALLAPQAGERIADLFCGLGNFSLPIA
ACGAETVGMEGAAALTERAEANARLNGLAGRTRFIHTDLFDTTPQTVAEWGRFDKMLLDP
PRSGAYAVVQALHTPYLPKRIVYVSCNPATFARDAAVLVQKGYRFRSAGIINLFAQTAHV
ETVACFDWGE
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgaatatcgccaccattcaaggcattgatcatgaagggcggggcattgcgcgtgttgac
ggcaaagcggtttttatcgaaggcgccctgccgcaggaaaccgtgtcttaccggctcaca
cgtagcaaaaagcatttcgacgaagccgaaatgctggccgtcctgcagccttccccgcac
cgcatttccccgcgctgccggcattaccgcacttgcggcggctgctcttggcagcatgtg
cgcagcgacgttcaggtagcctataagcagcggattttggaagaacagctgcaacggctg
gcgaacattcagccgcaacagtatttgcccgccatttacggccgcagctggggctaccgt
cagcgggcgcggctcagtgtggcccatccggcaggcggcaaagcggttttcggtttccaa
agccgccacagtcaccgcattgtggacatacaggagtgccccgtgttgtcgccgccgttg
gccgagcaattggctagcgtgcgctgtttgctgaatgaagtggccggggccgatatcggc
gccgtcgaactgcatcagggcgaagaagcttgcgcactcaccctgcacggccgacgcttt
cccccacctgtgctggctgtgctgcggaaacaggcggccgcttggagccgccaaggttgg
cagctttatctgcaaaccggccggcaagcggagccgctgctgccggccgaagcgggcctg
ttttaccgcttgcccgaatatggcttgaccctgccttaccgcccgggtgatttcacccaa
atcaatgccgacaccaatgccctgatggtgcgccgggcgctggctttgttggcacctcag
gccggcgagcgcattgccgacctgttttgcggattgggcaatttcagcctgccgattgcc
gcctgcggtgccgaaaccgtgggcatggagggcgcggcagcgttaaccgagcgggccgaa
gccaatgcccgcctaaacggcctggcggggcgcacccgtttcatccacaccgatttgttc
gacaccactccgcagacagtggccgaatgggggcgtttcgacaaaatgctgctcgatccg
ccgcgcagcggcgcgtatgccgtggtgcaggcgctacatacgccttatctgccgaagcgg
attgtgtatgtatcgtgcaatcccgctacgtttgcccgcgatgcggcggtattggtgcag
aagggctaccgcttccgcagcgccggcatcatcaatctgtttgcgcaaaccgcacatgtg
gaaacggtcgcttgttttgattggggcgaataa
DBGET
integrated database retrieval system
