Neisseria shayeganii: H3L94_06640
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Entry
H3L94_06640 CDS
T07084
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
nsg
Neisseria shayeganii
Pathway
nsg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nsg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
H3L94_06640
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nsg03019
]
H3L94_06640
Enzymes [BR:
nsg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
H3L94_06640
Messenger RNA biogenesis [BR:
nsg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
H3L94_06640
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Cas3-like_C_2
AAA_22
ERCC3_RAD25_C
Motif
Other DBs
NCBI-ProteinID:
QMT39558
UniProt:
A0A7D7NAK6
LinkDB
All DBs
Position
complement(1365938..1367308)
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AA seq
456 aa
AA seq
DB search
MNPFASLGLSPEITEALSEQGYEQPTAIQSAAIPKILAGHDLLAAAQTGTGKTAAFMLPG
LERLKRYANASTSPAMHPVRMLVLTPTRELADQIDQNTSAYIKNLPLRHTVLFGGVNMDK
QTQSLRSGCEIVVATVGRLLDHVQQKNIRLDKVEIVVLDEADRMLDMGFIDDIRRIMQML
PKQRQTLLFSATFSPPIRKLAQDFMTQPEQVETAPQNTTNANVEQHIIAIDTMQKRNLLE
RLIVDLNMNQVIVFCKTKQSVDQVARDLVRRQLSAAALHGDKSQQSRLETLSDFKAGQLR
VLVATDVAARGLDIAELPFVINYEMPSQAEDYVHRIGRTGRAGAEGVAISLMDEDEQKMF
ESIKELIGKDLAVERIEGFEPRWWQKQPAQAAEPAVDQQRRATREGGRRSAEGGRGGKNK
DTVEPAQACHKIPGRQRRSRRERSVCALVQPNYGVR
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
gtgaatccttttgccagtttgggcttgtccccagaaattaccgaagctttaagcgagcag
ggctacgagcagccgaccgccattcagtctgccgccattccgaaaatattggccggccac
gatttgctggccgccgcgcaaaccggcaccggcaaaacggcggcttttatgctgcccggt
ttggaacgcttgaagcgttacgccaatgccagcacgtcgccggccatgcaccccgtgcgt
atgctggtgctgacgcccacgcgcgaattggccgatcaaatcgaccaaaatacctcggct
tacatcaaaaacctgcctttgcggcatacggttttgtttggcggcgtcaatatggacaag
caaacccaaagcctgcgcagcggttgcgaaatcgtggtggccaccgtgggacggctgttg
gatcatgtgcagcagaaaaacatccgtttggacaaagtggaaatcgtggtattggacgag
gccgaccgcatgctggacatgggctttatcgacgacatccgccgcatcatgcagatgctg
ccgaaacagcgccagaccctgctgttttccgccactttctcgccgcctatccgcaaattg
gcgcaagactttatgacccagcccgagcaggtggaaaccgcgccgcaaaacaccactaat
gccaacgtggagcagcacattatcgccatcgataccatgcagaaacgcaatctcttggaa
cgcttgattgtggatttgaacatgaatcaagtgattgtgttttgcaaaaccaagcagagc
gtggatcaggtggcgcgcgatttggtgcggcgtcagttgagtgcggcggctttgcacggg
gataaatcccagcagagccgtttggaaactttaagcgacttcaaagccggtcagctccgt
gtgttggtggccaccgatgtggccgcgcgcggtttggacattgctgagctgcctttcgtc
atcaattacgagatgccctcccaagcggaagattatgtgcaccgtatcggccgtaccggc
cgggccggcgcggaaggggtggcgatttccttgatggacgaagacgagcagaaaatgttc
gagtcgatcaaagaattgatcggcaaagatttggcggtggagcggattgaaggattcgag
ccgcgttggtggcaaaaacagcccgctcaagcggcagaaccggccgtcgatcagcaacgc
cgtgcaacgcgcgagggcggccgccgctcggcagaaggcggtcgcggaggcaagaacaaa
gacacagtcgagccggcgcaagcctgtcacaaaattccggggcgccaacgccgcagccgc
cgcgaacgttcggtttgtgctttggtgcagccgaattacggggtgaggtaa
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