KEGG   Neisseria shayeganii: H3L94_07180
Entry
H3L94_07180       CDS       T07084                                 
Symbol
cas8c
Name
(GenBank) type I-C CRISPR-associated protein Cas8c/Csd1
  KO
K19117  CRISPR-associated protein Csd1
Organism
nsg  Neisseria shayeganii
Brite
KEGG Orthology (KO) [BR:nsg00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:nsg02048]
    H3L94_07180 (cas8c)
Prokaryotic defense system [BR:nsg02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Subtype I-C factors
    H3L94_07180 (cas8c)
SSDB
Motif
Pfam: Cas_Csd1 DUF5554
Other DBs
NCBI-ProteinID: QMT39656
UniProt: A0A7D7NAM8
LinkDB
Position
complement(1479100..1480914)
AA seq 604 aa
MMLHALTRYYQRKAVSEGGVAPEGFEKKEIPFVIVLDRHGRFIQLEDTREARGKKKVGRA
YLVPKASARSGSKSYETSNVLWDHYGYVLAAAKEVDGIAKKMPDAAAAEAEKNRILADNQ
HASFVAKVDELKEALPDDFGIAAVATFLASTEEKTKVFQSKNWAECLKIKGCNLSFRLVD
EVSALVCQSKALQNYLAAEKEGEESDQQEGICLVTGQKAPIARLHSSIKGVNAKPSPFAS
VNLAAFESYGKAQGFIFPVGEQAMFEYTTALNMLLASDNRFRIGDVTAVCWSEKPTLLES
RVALMINGGGKDNPDAHIDEVKSLYKSLHNGKYAEPNAKDKFYLLGLSPNAARIVVRFWH
ETTVAALSENIVRWYDDLQMVRGEKSLYPEFMPLMRLLCNLVLEGKAENLPPDLISQVTQ
SALSNRPLPVSLLQIALRRNKAEQKVTYGRASLIKAYLNRAVRAGSLKNMKELTMSLDRE
RGDIGYVLGRLFAVLEKAQGEANPNLNATIGDRYFGSASSTPVAVFGTLMRLVPHHLSKL
EHEGRAVQLKWEIRQILDQCQHFPSHLNLEQQGLFAIGYYHETQFLFTKDALKDLFNQAK
SAKE
NT seq 1815 nt   +upstreamnt  +downstreamnt
atgatgcttcatgccttgactcgctattatcagcgtaaagccgtttcagaaggtggagtg
gctccggaaggatttgagaaaaaagagattccctttgtaattgttctcgataggcatgga
cgcttcatccagttggaagatactcgtgaagcgagaggtaaaaaaaaggttggccgtgct
tacttggtgcccaaggcttctgcgcgcagtggctccaaatcctacgaaaccagcaatgtt
ttgtgggatcactatgggtatgtgttggctgcagccaaggaagttgacggcatagccaaa
aaaatgccggatgcggcggcggctgaggctgaaaaaaaccgtatattggcagataaccag
catgcaagttttgtggccaaggttgatgagctgaaagaagcgttgccggatgattttggt
attgcggcagtggctacgtttttggcatcgacggaagaaaaaacaaaggttttccaatcg
aaaaattgggctgagtgcttgaaaatcaaaggctgtaatttgagtttccgtctagttgat
gaggtttcggctttggtttgccaatcaaaagccttgcaaaattacttggcggcagagaag
gaaggagaggagagtgaccagcaggaaggaatctgcttggttactggtcagaaggcgccg
attgctcgcctgcattcgtccatcaagggggtaaatgccaagccgtctccttttgcttcg
gttaatttggcggcttttgagtcgtacggtaaggcgcagggatttatttttcctgtcggc
gagcaggcgatgtttgaatacaccactgcgctcaatatgctgctcgccagtgataaccgc
tttcgtattggtgatgtgaccgccgtgtgctggagcgaaaaacccacgcttttggagagt
cgggttgctctcatgattaatggcggcggcaaagacaatcccgacgcgcatatcgacgaa
gtgaagtcgctttataagagcttgcacaacggaaaatatgctgagccgaatgccaaggac
aagttttacctgttgggtttgtcgccgaacgcggcgcggattgtagtacgtttctggcat
gagaccacggtagcagcattgtcggaaaatattgtccgctggtatgacgatttgcagatg
gtgcgcggcgaaaaatcactttatcccgagtttatgccgttgatgcgcttgctgtgcaat
ttggtattggaaggcaaggcggaaaatttgccgccggatttgatttcacaggttacccaa
agcgctttaagtaatcgtccgttgccagttagcctgttgcaaatcgctttgcgccgtaac
aaggccgagcaaaaagtaacttatggacgggcatcattgattaaggcttatttaaaccgc
gctgtccgggcgggtagtttgaaaaacatgaaggagttgacaatgagtttagaccgagaa
agaggggatattggttatgtacttgggcggttgtttgccgtactggagaaagctcagggg
gaggccaatccaaatttgaatgccaccattggcgaccgctattttggttcggccagtagc
acgcctgtcgcagtattcggcacattgatgcgcttggtgccgcaccatttgagcaagctc
gaacatgaaggccgtgctgtgcagctgaaatgggaaattcggcagattttagatcaatgt
caacactttcccagccatctcaatctcgaacaacaaggtttgttcgctattggttattac
catgaaacccaatttttatttaccaaagatgctttgaaagatctgttcaaccaagccaaa
tctgctaaggagtga

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