Neisseria shayeganii: H3L94_11685
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Entry
H3L94_11685 CDS
T07084
Name
(GenBank) RNB domain-containing ribonuclease
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
nsg
Neisseria shayeganii
Brite
KEGG Orthology (KO) [BR:
nsg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nsg03016
]
H3L94_11685
Enzymes [BR:
nsg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
H3L94_11685
Transfer RNA biogenesis [BR:
nsg03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
H3L94_11685
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNB
Motif
Other DBs
NCBI-ProteinID:
QMT40464
UniProt:
A0A7D7RUX4
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All DBs
Position
2376240..2378093
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AA seq
617 aa
AA seq
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MNIFYEESGQFKVASVVQKNDSTYQVDTQHGKRTKVKANHVFVEFEMPLQDFLARVEAEA
AEIDTDLLWEVCGEEEFSAGSIAEEYFGHPASQIELAATLMALYAAPMYFYKKAKGVFKA
APEETLKQALAAIERKKQQEAQIEAWAEELQAGSLPASVAADLKQILHAPDKQSLTYKAF
TKAAEALKISAYQLAKQTGGVTSVPQYLLDGFTVKHFPKGTALPSLEIPTYAELPAAEGV
TAFSIDDESTTEIDDALSLQDLAGGGKRVGIHIAVPTLLMAADSPIQALVNERQSTVYYP
GGKITMLPDNWIAAFSLDQGERPALSIYFDVDEQFQVASPNIRLERVQIGANLRIQQIES
LFNRQSGLQAENGEQFAHHHDLCWFYQFALALQKQRNRYDADQPPQYDYGIEFDENGQVR
ISRRERGAPIDTLVSEMMILANSTWAKMLDDHGLPGLFRVQPTAGKVRMSTKSEAHIGMG
VQHYGWFTSPLRRAADCINQQQLLGLISEHFEPRFTHNDSMLFAALRDFDTAYAAYADFQ
RQMEAYWSLVYLQQQGERELQAVLLKDDLVRIEGLPLLGRAVGIPIDIPPKTRLKLGITD
LDADKQLLGLKYLNAVV
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atgaatattttttacgaagaaagcggccagttcaaagtggcttctgtggtgcagaaaaac
gacagcacttaccaggtggatacgcaacacggcaaacgaaccaaagttaaggcaaaccat
gtttttgttgagttcgagatgcctttgcaagattttttggctcgggttgaagccgaagcg
gcagaaatcgacaccgacttattgtgggaagtatgtggtgaagaggagttttccgcaggc
agcattgccgaagaatatttcggtcatccggccagccaaatcgaattggccgccaccttg
atggctttatatgcggccccgatgtatttctataaaaaagccaaaggtgtgttcaaagct
gctcccgaagaaaccttaaaacaagctttggccgccattgagcgcaaaaaacagcaagaa
gcgcaaattgaagcatgggcggaagaattacaagcgggcagtttgccggccagcgttgct
gcggatttgaagcagattctgcatgcgccggacaaacagtcccttacttacaaggccttt
accaaggctgcggaggctttgaaaatttccgcctaccaattggccaaacaaaccggcggc
gtaacatccgtgccgcaatatttgttggacggtttcacggttaagcatttccccaaaggc
acagcgttgccgtcgcttgagattccgacttatgccgaattgccggcggcggaaggcgtc
acggctttttcgattgacgacgagagcactaccgaaattgatgatgcgttatctttgcaa
gatttggcgggcggcggcaagcgggtcggcattcatatagcggtgccgactttgctgatg
gcggccgacagcccgattcaggcgctggtgaacgagcggcagagtacggtgtattacccg
ggcggcaaaatcactatgttgccggataattggattgctgctttcagtctcgatcaaggc
gaacgccccgccttgagcatctattttgatgtggacgaacagtttcaggtagcctcgccg
aatatccgcttggagcgggtgcagatcggagcgaatctgcgcatccagcaaatcgaatct
ttgtttaaccgacaaagcggtttgcaggccgaaaacggggagcagtttgcccatcatcac
gatttatgctggttttaccaatttgccctcgctttgcaaaaacagcgtaaccgctatgat
gcggatcagccgccccaatacgactacggcattgagttcgacgaaaacgggcaggtacgc
atcagccgtcgcgaacgcggtgcgccgatcgataccctggtttccgaaatgatgattttg
gccaacagcacctgggccaaaatgttggacgatcacggcttgcccggcttgtttcgtgtt
cagccgaccgccggcaaggtgcgcatgagcaccaaatccgaagcgcatatcggcatgggc
gtgcaacattacggctggtttacttcgcctctgcggcgggcggccgactgcatcaatcag
cagcagttactcggtttgatcagcgaacatttcgagccgcgctttacgcataacgacagc
atgctgtttgctgctttgcgtgatttcgatacggcttatgccgcctatgcagactttcag
cgtcagatggaggcttattggagtttggtgtatctgcagcagcaaggtgagcgtgagttg
caggcggtattgctgaaagacgatttggtacggattgaaggcctgccattattggggcgc
gccgtcggcattccgatcgatattccgccaaaaacccgcttgaaattgggcattaccgat
ttggatgccgacaaacagctattggggttgaaatacctaaacgcagtggtctga
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