Nostoc sphaeroides: GXM_02611
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Entry
GXM_02611 CDS
T06325
Name
(GenBank) rpoB, DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
nsh
Nostoc sphaeroides
Pathway
nsh03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
nsh00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
GXM_02611
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nsh03021
]
GXM_02611
03400 DNA repair and recombination proteins [BR:
nsh03400
]
GXM_02611
Enzymes [BR:
nsh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
GXM_02611
Transcription machinery [BR:
nsh03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
GXM_02611
DNA repair and recombination proteins [BR:
nsh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
GXM_02611
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
QFS45134
UniProt:
A0A5P8VXN2
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All DBs
Position
Gxm1:complement(2361317..2364598)
Genome browser
AA seq
1093 aa
AA seq
DB search
MEPAFLLPDLIEIQRSSFRWFLEEGLIEELNSFSPITDYTGKLELHFLGHNYKLKEPKYS
VEEAKRRDSTYAVQMYVPTRLINKETGEIKEQEVFIGDLPLMTDRGTFIINGAERVIVNQ
IVRSPGVYYKSEIDKNGRRTYSASLIPNRGAWLKFETDRNDLVWVRIDKTRKLSAQVLLK
ALGLSDNEIFDALRHPEYFQKTIEKEGQFSEEEALMELYRKLRPGEPPTVLGGQQLLDSR
FFDPKRYDLGRVGRYKLNKKLRLSVPDTMRVLTAGDILAAVDYLINLEYDIGNIDDIDHL
GNRRVRSVGELLQNQVRVGLNRLERIIRERMTVSDAEVLTPASLVNPKPLVAAIKEFFGS
SQLSQFMDQTNPLAELTHKRRLSALGPGGLTRERAGFAVRDIHPSHYGRICPIETPEGPN
AGLIGSLATHARVNLYGFLETPFRPVENGRVRFDLPPAYMTADEEDDLRVAPGDIPVDET
GHIIGPLVPVRYRQEFSTTTPEQVDYVAVSPVQIVSVATSMIPFLEHDDANRALMGSNMQ
RQAVPLLKPERPLVGTGLEAQGARDSGMVVVSRTDGDVTYVDATEIRVRPKPNTPEIKYT
LSKYQRSNQDTCLNQKPLVRIGERVVAGQVLADGSSTEGGELALGQNIVVAYMPWEGYNY
EDAILISERLVQDDVYTSIHIEKYEIEARQTKLGPEEITREIPNVGEDALRQLDEQGIIR
IGAWVEAGDILVGKVTPKGESDQPPEEKLLRAIFGEKARDVRDNSLRVPNGEKGRVVDVR
LFTREQGDELPPGANMVVRVYVAQKRKIQVGDKMAGRHGNKGIISRILPAEDMPYLPDGS
PVDIVLNPLGVPSRMNVGQVFECLLGWAGQTLGVRFKITPFDEMYGEETSRRIVHGKLQE
ARDETGKDWVYNPDNPGKIMVYDGRTGEPFDRAITIGVAYMLKLVHLVDDKIHARSTGPY
SLVTQQPLGGKAQQGGQRFGEMEVWALEAFGAAYTLQELLTVKSDDMQGRNEALNAIVKG
KAIPRPGTPESFKVLMRELQSLGLDIAVHKVETQTDGSSLDVEVDLMADQSARRTPPRPT
YESLSRESLDDDE
NT seq
3282 nt
NT seq
+upstream
nt +downstream
nt
atggaacccgcctttctgttgcccgacttgattgaaatccagcgctcaagctttcgctgg
tttttggaagaagggctgatagaagaacttaactcctttagtcctattacagattatacg
ggcaaattagaactgcattttttgggtcataactacaaactcaaggagccaaagtacagc
gtcgaagaagccaaacggcgggatagtacttatgccgtccaaatgtatgttcccacacgg
ctgattaataaagaaaccggggaaatcaaagagcaagaggtattcattggtgatttgcct
ttgatgaccgatcgcggcacgtttattattaacggagccgagcgggtaattgtcaatcaa
atagtgcgatcgccaggagtctactacaaatcagaaatcgacaaaaacgggcgacgtact
tattcagctagcttaattcctaaccggggagcatggctgaaatttgaaacagaccgtaac
gatttggtttgggtacgcatcgacaaaacccgcaaactgtcagcgcaggtacttctaaaa
gctttagggttatcagacaacgaaatctttgacgccttacgccaccccgaatatttccaa
aaaaccatcgaaaaagaagggcaattctctgaagaagaagccctgatggagttatatcgg
aaactgcgtcctggtgaaccacccacggtattaggtggacaacaactccttgattctcgt
ttctttgacccgaaacgttatgaccttggtcgcgttggacggtacaaactcaacaagaaa
ttgcgcctttctgtcccagacaccatgcgggtgttgactgctggcgatatcttggcagcc
gtagattacctcattaacctagaatatgacatcggtaatatcgatgacattgaccattta
ggcaaccgtcgggtgagaagcgttggcgaattgctgcaaaaccaagtgcgggtaggctta
aaccgcttagagagaatcattcgggaacggatgaccgtatccgatgcggaagtgctaact
cccgcttccttggtgaaccccaaaccattggtagcagcaattaaagaattctttggttcc
agccaattaagtcagttcatggatcaaaccaatcccttagcagaactgacccacaaacgc
cggctctcagcccttggccctggtggtttaacccgagaacgcgccggttttgccgtgcgg
gatattcatcctagtcactatggacgcatttgccccattgagacaccagaaggccccaac
gccggattgattggctccttagcaacccacgcgcgggttaacctgtacggcttcctcgaa
acaccatttagacctgtagaaaatgggcgagtcagatttgatctgcctccagcctacatg
acagccgatgaagaagacgacctgcgggttgctccgggagatattcctgtagatgaaact
gggcatattatcgggccactagtgccagtccggtatcgccaagaattttccaccacaaca
ccagaacaggtggactacgtagcagtatctcctgtacagattgtgtcggtagcaaccagc
atgattcctttcttggagcatgatgacgctaaccgagcgctgatgggatcgaacatgcaa
cggcaagcagtacctctgctcaagccagaacgtcctttggtgggtaccggtttggaagcc
caaggagcaagagactccgggatggtggttgtatcgcgtaccgatggcgatgtcacttat
gtggatgctacagaaattcgcgtccgtccgaaacctaataccccagaaattaagtacacc
ctttccaagtaccaacgttccaaccaagacacctgtttaaatcagaaacctctcgtccgc
attggggaacgggttgttgctggtcaggtattggctgatggctcctccaccgaaggcggt
gaattggcgctaggacaaaatatcgtcgttgcctatatgccttgggaaggctacaactac
gaagacgcgattttaatctctgaaagactggtgcaggatgatgtctacacctcaattcac
attgaaaaatatgaaattgaagctagacaaaccaaactggggccagaagaaatcaccaga
gaaattcccaacgtcggcgaagatgccttgcgtcagttggatgaacagggaattattcgc
attggggcatgggtagaagctggtgatatcttggtaggaaaagtcacacccaagggtgaa
tctgatcaaccgccagaagaaaaactgttgcgggcaattttcggtgaaaaagcgcgggat
gtgcgggataattctctgcgagtaccaaacggtgaaaaaggtcgcgtagttgatgtgcgc
ttgtttactcgtgaacaaggcgatgaactgccaccaggagccaatatggtagtccgggtt
tatgttgcccaaaaacgcaaaatccaagttggtgacaaaatggcaggacgccacggtaat
aaagggattatttctcggatattaccggcggaagatatgccttatttgcccgatggttca
ccagtggacattgtacttaaccccttgggcgtacccagtcggatgaacgtcggacaagta
tttgaatgcctcttgggttgggctggtcagaccttgggagtccgatttaagattactcca
tttgatgaaatgtacggtgaagagacatcccgccgaatcgtgcatggcaaattgcaagaa
gcacgggacgaaacagggaaagactgggtatataacccagataacccaggcaaaatcatg
gtgtatgacggtcgtacaggcgaaccctttgaccgagcaattaccatcggtgtggcttat
atgctgaaactggtgcatttggtcgatgataagatccacgcccgttccacaggcccatac
tcactggtgactcagcaacccttgggtggtaaagcccaacaaggtggtcagaggtttgga
gaaatggaagtgtgggcattggaagcctttggtgcagcttacaccttacaggaattgctc
acagttaaatctgacgatatgcaaggacggaatgaagcgttaaatgcgatcgttaaaggt
aaggcaattcctcgacctggaaccccagaatcctttaaggtgttaatgcgcgagttgcaa
tcattggggttagacattgccgtacacaaggtagaaactcaaacagacggcagttcccta
gatgtagaagtcgatttgatggcagaccaatcagcacgtcgcacaccacctcgaccaact
tatgaatctctttcccgcgaatcgctggatgatgacgaatag
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