Nostoc sphaeroides: GXM_03255
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Entry
GXM_03255 CDS
T06325
Name
(GenBank) uvrD, DNA helicase II / ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
nsh
Nostoc sphaeroides
Pathway
nsh03420
Nucleotide excision repair
nsh03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
nsh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
GXM_03255
03430 Mismatch repair
GXM_03255
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nsh03400
]
GXM_03255
Enzymes [BR:
nsh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GXM_03255
DNA repair and recombination proteins [BR:
nsh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GXM_03255
MMR (mismatch excision repair)
Other MMR factors
GXM_03255
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
UvrD_C_2
AAA_19
DUF3138
AAA_30
DEAD
SnoaL_3
Helicase_RecD
Motif
Other DBs
NCBI-ProteinID:
QFS45778
UniProt:
A0A5P8VZB2
LinkDB
All DBs
Position
Gxm1:2948355..2950814
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AA seq
819 aa
AA seq
DB search
MSDTNFTAALPSESLHSELSERSPVSSLREKILAIRNSLRPGQQQMADWQSGPLAISAVP
GAGKSTGMAAAAAIAIARQYERSSSRRQLVVVTFTRSAAANIKAKIRKDLKKLSLPQTGF
FVYTLHGLALNIASRHSDLSGLQLQNVTLITPTQSHRFIRTAVEQWIANNPAIYLRLLEG
HQFDGEETERLRRQSVLRTEVLPELANTVIHEAKSSGISPEKLREWSKQTTDEYTILSIA
AGLYEQYQNLMRSRDFIDYDDMILAALRVLENDSARRIEQNQVFAVFEDEAQDSSPLQTQ
LLEILASDEGDNSLLLTDAINRVSTADPCTDAIHRVSPNSPLNLVRVGDPNQAINSTFTP
ADPIYFRQFCEECDRIKRLATMDQAGRSTRIIIEAANFALKWINNQSLAKTNNGQQTPDN
RQVPFRLQTIRPVEVGDPQDNANPEPIGRGLELYTPRDIHHTVELLSQRVIELFGEDPTE
QSAAILVRENRQGRWLAEALTPVCKEYNITLYDVGERDRRSHVPQEILALLQFCDRPHSP
DYLKAALEALVQRQLIPTQDLNALASLPEEFLYPGPLAAPQPETVQKAARLCRNLLRARL
ELPLYQLISFLALTLNYDQAELATADKLAERVNQQIAGNSSMGGMLSTLSEIVSSERFEP
VETEDSEERYTRRGQLTIITMHKAKGLDWDYVFLPFLHENLIPGRFWVPPQSQFLGDFTL
SEVARAQIRAALHGESTIPDVTQAWEQAKHLKISEEYRLLYVAMTRAKRLVWMSAAQKAP
FTWSKPENLQEQAPCPVFPALKRQFPECVMNLAVMAKQA
NT seq
2460 nt
NT seq
+upstream
nt +downstream
nt
atgtcagacactaattttactgctgctttgccttcggaatcactccactcagaattgtct
gaacgatcgcctgtttcttctctgcgggagaaaattctcgcaattcgcaacagtctccgc
ccaggacagcaacaaatggctgactggcaatctggccccctagctatttctgctgttccc
ggtgcaggcaaatctactgggatggcggcggcggcagcgatcgcgatcgcccgtcaatat
gaacgttcatcctcgcgtcgtcaattagtagttgttacctttactcgttcagctgctgcc
aatattaaagcgaagatccgcaaagacttaaagaaattatcattacctcagacgggcttt
tttgtctatacgctacatggtctagcgttgaacattgccagtcgccattctgatttatcg
ggtttgcagttacaaaatgtcacattaattacaccaacccaaagtcaccgttttatccga
acagccgtagagcaatggattgcaaataatccagcaatatatttacggttattagaaggt
catcaatttgacggagaagagacagaaaggttgcgtcgccaatcggtgctacgaacagaa
gtattgccggaattagctaatacggtaattcatgaagcaaaaagttctgggatatcgcca
gaaaaattgcgggagtggagtaaacaaaccacagacgaatatacaattttgagcatagcg
gcgggattgtatgagcaatatcaaaacttaatgcgatcgcgtgatttcatcgactacgat
gatatgattttagccgcactacgcgttttagaaaacgacagcgcccgtcgcattgagcaa
aaccaagttttcgccgtctttgaagacgaagcccaagattccagccctcttcagacgcaa
ttgttagaaattttggcaagtgatgagggagataattctttactcctaacagacgcgata
aatcgcgtctctactgctgacccttgtacagacgcgattcatcgcgtctctcctaactcc
ccactcaacttggtacgagttggtgatcccaaccaagcgattaactctacttttacccca
gccgatccgatttattttcggcaattttgcgaagagtgcgatcgcatcaaacgattggca
acgatggatcaagccggtcgcagtactagaattattattgaagctgctaactttgctctc
aaatggatcaataatcagtcgttagcaaaaacgaataacggacaacagactcctgacaac
cgacaagtaccatttcgcttgcagacaattcgccctgttgaagttggtgatccgcaagat
aacgccaacccagaaccaataggacggggattagaactttataccccgcgtgacatccat
catacggttgaattgttatctcaaagggtgattgagttatttggtgaagacccaacagaa
caaagtgcagcgattttagtgcgagaaaatcgccaaggacgatggttagcagaagctcta
acacctgtgtgcaaagagtataatattacactttatgatgtgggagaacgcgatcgccgt
tcccatgttccccaagagattttagcattactgcaattttgcgatcgcccccactccccc
gattacctcaaagccgcgctagaagcattagtacagcgccagttaattcctactcaagac
cttaacgcccttgctagtctcccagaagaatttttgtatcctggccccctagcagcacct
cagccagaaacagtccaaaaagctgctcgtttgtgtcgcaatttacttcgcgcccgcttg
gaattgcccctgtaccagctaatttcctttctcgccttgaccttaaattacgaccaggca
gaattagcaactgctgacaaacttgcagaacgggtaaaccagcagatagcaggcaatagt
tcaatggggggaatgctgtcaactttaagtgaaatcgtcagttccgaacggtttgaacca
gtggaaaccgaagattcggaagaacgttacactcgtcgcggtcaactgactattattaca
atgcacaaagccaaagggctagattgggactatgtgtttcttccctttctgcacgaaaac
ttgattcctgggagattttgggttcctccccaaagccagttcttaggggattttacctta
tcagaagtagcccgcgcccaaattcgggctgctctccacggagaatctactataccagat
gttacacaagcatgggaacaagcaaagcacttgaaaatatctgaggaatatcgtttactc
tacgttgccatgacacgagcaaagcgtctggtgtggatgtcagccgcccagaaagccccc
tttacttggagtaagccggagaatttacaagaacaagcgccttgtccggtttttccagca
ttaaagcggcaatttcctgaatgtgtgatgaatttagcagtaatggctaaacaagcgtga
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