Nostoc sphaeroides: GXM_08348
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Entry
GXM_08348 CDS
T06325
Name
(GenBank) recD, exodeoxyribonuclease V alpha subunit
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
nsh
Nostoc sphaeroides
Pathway
nsh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nsh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
GXM_08348
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nsh03400
]
GXM_08348
Enzymes [BR:
nsh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
GXM_08348
DNA repair and recombination proteins [BR:
nsh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
GXM_08348
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
SH3_13
UvrD_C_2
Viral_helicase1
AAA_11
UvrD-helicase
AAA_22
NAT10_TcmA_helicase
PIF1
nSTAND3
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
QFS50854
UniProt:
A0A5P8WDX8
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All DBs
Position
Gxm2:complement(1270518..1272824)
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AA seq
768 aa
AA seq
DB search
MMRHLIDEKFPSLTLSEIQQYLESGLFRGIGKKTAQALVNYFGTSTLSVLDTAPEKLDQV
PLLNTYRITAITKAWSESKRNPNFGVITQLLAVGTSLKLALKICEYYGQKTSYILENNPY
RLIDDIDGIGFKTADELAISLGIPLCSDTRYMSALIHVLKSGLRDGNCFLPSEQLVSIAT
DLLSSPQHSADVNFLNTMVEQLLSKGTLVSGDGGNSVYLKATYRAELCVSLRILSLLEQP
THPTEHLEHWLTEFQTTDYRQLSRLSDEQISALMMAAKHPISIITGGPGRGKTYVLKTLV
EWLIHSCCAIALAAPTGKAANRMKDATGIEATTIHRLLQWQGHQQVFLYNEDNPLNLDFL
IVDEFSMVDIFLFNSLLKALSKKTRILLVGDFDQLPSIGAGMVLRDLIVSELVPTTRLQT
IYRQKQDSPIIYAANDVNCGIIPALHNFNQVSNWMDVGDCAMIQGTNPQATAKTIVELVK
AINQSNVNLNQQLIILAPQKQGDCGVHNLNRLLAPIFNPKKENQLEVVSGSVIYRVGDRV
IQLKNRYETVPPVMNGEMGRVIAVDASKEMLTIDWEGGAIVDYYRGDLEQIMHSFCITCH
KSQGSEFQYVIFPLLTSNSRMLTRQLLYTTMTRAVGTFIVVGQHEALKIAVATDKPAQRF
TGLTNLLISPVEQLREIWQNLSNTRKATSATTSSSTVTVASRLKQRQLTATLGQMTTIGS
LALQMYESKYGYRPPKQPELVGKFRFNTYHYETTAIDEIDSAIDAVLR
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atgatgaggcatctaattgacgagaaatttccatcgctaaccttgtccgaaatccagcag
tatttagaaagtgggctgtttcgtgggattggcaaaaaaactgcccaagctcttgtgaat
tactttggtacttcgaccttatcagtgttagacacagctccagaaaaacttgatcaggtt
cctctccttaatacttatcgaatcactgcaattaccaaagcttggtccgaaagtaaaagg
aatccgaattttggagtgattacccaacttttagctgtgggaacttcattgaagttagcg
ttgaaaatttgtgagtattacggacagaaaacttcatatatcctggaaaacaacccttac
agattaattgatgacattgatggcatcggttttaagactgctgatgagttagcaatatct
cttggtatccctctatgcagtgatactcgttatatgtcagctttaatccatgttttaaaa
tcaggcttgcgtgatgggaattgttttttaccatctgagcaattagtaagtattgccact
gacttgctttcttcaccacagcatagtgccgatgttaactttttaaatacaatggttgaa
cagttactctccaaggggactttagtatcgggtgatggtggtaatagtgtttatctcaaa
gctacttatcgggctgaactttgtgtgagtttaagaattctttctctccttgagcaaccg
actcaccccacagaacatttagaacactggttaaccgaattccaaactactgactatcgc
caactttcacgattaagtgatgaacaaattagcgccttgatgatggcagctaaacatcca
ataagcattattactggaggtccaggtcggggaaaaacttatgtactgaaaactttagta
gaatggttgatacatagttgttgtgcgatcgcactagccgctccaacaggaaaagccgcc
aaccggatgaaagatgctacaggcattgaagcaactaccattcaccgtttattgcaatgg
cagggacatcaacaagtttttctttataacgaggataatcctctgaatctggattttcta
attgttgatgaattttcaatggttgacatatttttgttcaattcactgttgaaagctttg
tccaaaaaaaccagaattttgctggtaggggactttgatcaattgcccagtattggggcg
ggaatggtcttgcgagatttaattgtttcggaactggtgccaacaacgagattacagaca
atttatcggcaaaagcaggatagcccgattatttatgccgccaatgatgtcaattgtggc
ataatcccagcactgcacaattttaatcaggtttctaattggatggatgttggcgattgc
gccatgatccaaggcacaaatccacaagcaacggcgaaaactattgttgagttagttaaa
gctattaaccagtccaatgtaaatttaaatcaacaactaataatcttagcgccgcaaaaa
caaggagactgtggagttcacaatctcaatcggcttcttgctcccatctttaatccaaaa
aaagaaaatcagttagaagttgtatctgggtcagtcatctaccgagtcggcgaccgggtt
atccaactgaaaaaccgttatgagactgtcccgcctgtgatgaacggcgagatgggtcgg
gttattgctgtagacgcgagcaaagaaatgttaacaattgactgggaagggggcgcgatc
gttgactactatagaggtgacttggagcaaattatgcactcattttgtatcacttgccac
aagagccaggggagtgaattccagtatgtgatttttccattactcacctctaactcccga
atgttaacccgtcaactgctttacaccaccatgactcgcgcagtgggtacattcatcgtt
gttggacagcatgaagcattgaaaattgctgtggcgactgataaacctgcccagcgtttt
actggactaaccaatttgctgatttcacctgttgagcaacttcgtgaaatctggcagaac
ttgagcaataccagaaaagctacaagtgcaacaacatcttcgtctactgttactgtcgct
tcgaggctaaaacaacgccaactgactgctacacttgggcagatgacgactattggtagt
cttgcactacaaatgtacgaatctaagtatggttatcgtccgccaaaacagcccgagctt
gtaggtaagtttcgctttaatacttatcactatgaaactaccgcaattgacgagattgat
tcagcgattgatgcagttctgcgctaa
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