Neisseria mucosa FDAARGOS_260: A6J88_02955
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Entry
A6J88_02955 CDS
T04958
Name
(GenBank) RNB domain-containing ribonuclease
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
nsi
Neisseria mucosa FDAARGOS_260
Brite
KEGG Orthology (KO) [BR:
nsi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nsi03016
]
A6J88_02955
Enzymes [BR:
nsi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
A6J88_02955
Transfer RNA biogenesis [BR:
nsi03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
A6J88_02955
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
Motif
Other DBs
NCBI-ProteinID:
ARC50368
LinkDB
All DBs
Position
complement(578683..580545)
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AA seq
620 aa
AA seq
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MNIFYEESGQFKVAAIVQKNDATYQVDTQHGKRTKVKANNVFAEFDGDMAAFLENAQAQA
ADIDTDLLWEVCGEEEFSAEAIAEEYYGHAPTKTELAATLIALYAAPMYFYKKAKGVFKA
APEETLKQALAAIERKKQQDAQIDAWAEALKRGEMPSEIAADLKTILHAPDKQSLTYKAF
IKAADALKTSAYELAKKTGGITSIPQYLQDGFEIKYFPKGTGFPDLPLPEMPDLPKADVT
AFSIDDESTTEVDDALSLTDLSNGSKRVGIHIAAPSLAVKPGDKMEKNIMERLSTVYFPG
GKITMLPENWIAAFSLDAGAYRPAVSIYFDVDSEFNVGEPTCKIEAVNIAENLRIQTIEP
HFNAETGLDEAGEMMFAHHQDLIWLHQFAVALQKARGKYEPDRAPQYDYSIELDEAGKVS
VVRRERGSPIDILVSEMMILANSTWAQMLHDNDLPGLFRVQPAGKVRMSTKSEPHIGMCV
QHYGWFTSPLRRAADYINQKQLLSLIDDTAEPLFQQSDAELFAALRDFDTAYAAYADFQR
QMEAYWSLVYLQQQGTSELTATILKEDLVRIEGLPLVTRATGIPFDALPKTQVLLKITEL
DPEKQFIALNYVKAVAPAVA
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atgaatatcttttacgaagagtccggccaattcaaagtcgccgccatcgtccaaaaaaac
gacgccacctaccaagtcgatacccaacacggcaagcgcaccaaagtgaaggcgaacaac
gtctttgccgagtttgacggcgatatggcggcgtttttggagaacgcgcaggcgcaggcg
gcggacatcgataccgatttattgtgggaagtatgcggcgaagaagaattttccgccgaa
gccatcgccgaagaatattacggtcatgcgccgaccaaaaccgagctggcggcgaccttg
attgcgctgtacgccgcgccgatgtatttctacaaaaaagccaaaggcgtgttcaaagcc
gcgcctgaagaaactttgaaacaagcacttgccgccattgaacgcaaaaaacagcaagac
gcgcaaatcgacgcttgggcggaagccttgaaacgcggcgagatgccgtctgaaatcgcg
gcggatttgaaaaccatcctgcacgcacccgacaagcagtcgctaacctacaaagccttt
atcaaagccgccgacgcgctgaaaacctccgcctacgaattggcgaaaaaaacgggcggc
attacgtccatcccccaatatctgcaagacgggtttgaaatcaaatacttccccaaagga
acaggtttccccgacctccctcttccggaaatgcccgacctgcccaaggccgacgttacc
gccttttccatcgacgacgaatcgaccaccgaagtggacgacgccttgagcctgaccgac
ttgagcaacggctccaaacgcgtcggcatccacatcgccgcgccgtcgctcgccgttaaa
ccgggtgacaaaatggaaaaaaacatcatggaacgcttgagcacggtctattttcccggc
ggaaaaatcaccatgctgcccgaaaactggattgccgcgttcagccttgatgcgggcgcg
taccgccctgccgtcagcatttattttgatgtggatagcgagttcaacgtcggtgagccg
acctgcaaaatcgaagccgtcaacatcgccgaaaatctgcgcatccaaaccatcgagccg
catttcaacgctgaaaccggcttggacgaagccggcgaaatgatgttcgcccaccatcaa
gacctgatttggttgcaccaattcgccgtcgccctgcaaaaagcgcgcggcaaatacgaa
cccgaccgcgcgccgcaatacgattacagcatcgaattggatgaagcaggcaaagtctcc
gtcgtccgccgcgaacgcggttcgcccatcgacatactggtcagcgaaatgatgatactc
gccaacagcacttgggcgcagatgctccatgataacgacctgcccggcctcttccgcgtg
caacccgccggaaaagtgcgcatgagcaccaaatccgagccgcacatcggcatgtgcgtg
caacattacggctggtttacctcgccgctgcgccgcgccgccgactacatcaaccaaaaa
caactcctcagcctgatagacgacaccgccgaaccgctcttccagcaaagcgatgccgaa
ctcttcgccgcactgcgcgatttcgacaccgcctacgccgcctacgccgatttccaacgg
cagatggaagcctactggagcctcgtgtacctgcaacagcaaggcacaagcgagctgacc
gcaaccatcctcaaagaagacctcgtccgcatcgaaggcctgccgctggtaacgcgcgcc
accggcatcccgtttgacgcgctgcctaaaacgcaagtcctgctcaaaatcaccgagctt
gaccccgaaaagcaatttatcgcgctgaactatgtgaaagctgtcgctcctgcggttgcg
taa
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