Neisseria mucosa FDAARGOS_260: A6J88_04040
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Entry
A6J88_04040 CDS
T04958
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
nsi
Neisseria mucosa FDAARGOS_260
Brite
KEGG Orthology (KO) [BR:
nsi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nsi03032
]
A6J88_04040
03400 DNA repair and recombination proteins [BR:
nsi03400
]
A6J88_04040
Enzymes [BR:
nsi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
A6J88_04040
DNA replication proteins [BR:
nsi03032
]
Prokaryotic type
DNA Topoisomerases
A6J88_04040
DNA repair and recombination proteins [BR:
nsi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
A6J88_04040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Toprim_4
Lar_restr_allev
Motif
Other DBs
NCBI-ProteinID:
ARC52175
LinkDB
All DBs
Position
795200..797506
Genome browser
AA seq
768 aa
AA seq
DB search
MAKNLLIVESPSKAKTLKKYLGGDFEILASYGHVRDLVPKNGAVDPEHDFAMKYELIKRN
AKHVDAIVAGAKEAENIYLATDPDREGEAISWHLFEILKSKRGLKNIKPQRVVFHEITKN
AVLDAVANPREIEMDLVDAQQARRALDYLVGFNLSPLLWKKIRRGLSAGRVQSPALRLIC
ERENEIRAFEAQEYWTVHLDSHKGRSKFTAKLAQYNGAKLEQFDLPNEAAQADVLKELEG
KEAVVTAIEKKKRSRNPAAPFTTSTMQQDAVRKLGFTTDRTMRTAQQLYEGIDVGQGAIG
LITYMRTDSVNLADEALTEIRHYIENKIGKEYLPSAAKQYKTKSKNAQEAHEAIRPTSVY
RTPESVKPFLSADQFKLYQMIWQRTVACQMTPAKFDQTTVDITVGKGVFRVTGQVQTFAG
FLSVYEESSDDEEGEDSKKLPEMSEGDKLPVDKLYGEQHFTTPPPRYNEATLVKALEEYG
IGRPSTYASIISTLKDREYVTLEQKRFMPTDTGDIVNKFLTEHFAQYVDYHFTAKLEDQL
DEIADGKRRWIPVMDKFWKPFIKQVEEKEGIERAKFTTQELDETCPKCGEHKLQIKFGKM
GRFVACAGYPECSYTRNVNETAEEAAERIAKAEAEQAELDGRECPKCGGRLVYKYSRTGS
KFIGCANYPKCKHVEPLEKPKDTGVQCPQCKKGNLVERKSRYGKLFYSCSTYPDCNYATW
NPPVAEECPNCHWPVLTIKTTKRWGVEKVCPQKECGWKEQIEPPAPKE
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaaaacctcttaatcgtcgaatcaccgtccaaagccaaaaccctgaaaaaatac
cttggcggcgatttcgaaattctggcctcctacggccacgtccgcgacctcgtccccaaa
aacggtgccgtcgatcccgaacacgacttcgccatgaaatacgagctgatcaaacgcaac
gccaaacacgtcgatgctattgttgccggagccaaagaagccgaaaacatctacctcgca
accgacccggatagggaaggcgaagcgatttcctggcatctttttgaaatcctcaaatcc
aaacgcggcctgaaaaacatcaagccgcagcgtgtcgtgttccacgaaatcaccaaaaac
gccgtgctcgacgccgtcgccaacccgcgcgaaattgaaatggacttggtcgatgcgcaa
caagcccgccgcgctttggactatctggtcggtttcaacctctcgccattgttgtggaaa
aaaatccgccgcggtttgagcgcgggccgtgtgcaaagtcccgccctgcgtttgatttgc
gaacgcgaaaacgaaatccgtgcctttgaagcgcaggaatattggacggtgcatctcgac
agccacaaaggccgcagcaagttcaccgccaaactcgcccaatacaacggcgcgaaactc
gaacaattcgacctgccgaacgaagccgcgcaagccgacgtgttgaaagaactcgaaggc
aaagaggcagtcgttaccgccatcgaaaagaaaaagcgcagccgcaatcccgccgcgccg
ttcaccacttctaccatgcagcaggatgccgtacgcaaactcggcttcaccaccgaccgc
accatgcgtaccgcccagcagctttacgaaggtatagacgtagggcagggcgccatcggt
ctgattacctatatgcgtaccgacagcgtgaatttggccgatgaagcgttaaccgaaatc
cgccattacatcgaaaacaaaatcggcaaagaatatctgccgagtgccgccaaacaatac
aaaaccaaatccaaaaacgcccaagaagcccacgaggcgatacgtccgacttccgtgtac
cgcacgcccgaaagcgtcaaacccttcttgagcgcagaccagttcaaactctatcaaatg
atttggcagcgcactgtcgcctgtcagatgacgcccgccaaattcgaccaaaccaccgtc
gatattaccgttggcaaaggcgtattccgcgtaaccggacaagtgcaaaccttcgcaggc
ttcctcagcgtttacgaagaaagcagcgacgatgaagaaggcgaagacagcaaaaaactg
cccgaaatgagcgaaggcgacaaactgcctgtggacaaactctacggcgaacaacacttc
accaccccgccgccgcgctacaacgaagccacgctggttaaagccctcgaagaatacggc
atcggccgcccctcgacttacgccagcatcatctccacgctcaaagaccgcgaatacgtt
acccttgagcaaaaacgcttcatgcccaccgatacgggcgacatcgtcaacaaattcctg
accgaacactttgcccaatacgtcgactaccacttcaccgccaaactcgaagaccagctc
gacgaaatcgccgacggcaaacgccgctggattcccgtgatggacaaattctggaaaccg
ttcatcaagcaagtggaagaaaaagaaggcatcgaacgcgccaaattcaccacgcaggaa
cttgacgaaacctgccccaaatgcggcgaacacaaactgcaaatcaagttcggcaaaatg
ggccgcttcgttgcctgcgccggctatcccgagtgcagctacacgcgcaacgttaacgaa
accgccgaagaagccgccgagcgcatcgccaaagccgaagccgaacaggcagaacttgac
gggcgcgagtgccccaaatgcggcggacggctggtgtacaaatacagccgtaccggcagc
aaattcatcggctgcgccaactaccccaaatgcaaacacgtcgagccgctggaaaaaccg
aaagacaccggcgtccaatgcccgcaatgcaaaaaaggcaacctcgtcgagcgcaaatcc
cgctacggcaaactgttttacagttgcagcacctatcccgactgcaactacgccacctgg
aacccgcccgtcgccgaagaatgcccgaactgccattggccggttttaaccatcaaaacc
accaaacgctggggcgtagagaaagtctgcccgcaaaaagaatgcggctggaaagaacag
attgaaccgcctgcgccgaaagagtga
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