Neisseria mucosa FDAARGOS_260: A6J88_04130
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Entry
A6J88_04130 CDS
T04958
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
nsi
Neisseria mucosa FDAARGOS_260
Pathway
nsi03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
nsi00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
A6J88_04130 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nsi03021
]
A6J88_04130 (rpoC)
03400 DNA repair and recombination proteins [BR:
nsi03400
]
A6J88_04130 (rpoC)
Enzymes [BR:
nsi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
A6J88_04130 (rpoC)
Transcription machinery [BR:
nsi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
A6J88_04130 (rpoC)
DNA repair and recombination proteins [BR:
nsi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
A6J88_04130 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Biotin_lipoyl_2
Apocytochr_F_C
Peptidase_M23
RPOC_hybrid
Motif
Other DBs
NCBI-ProteinID:
ARC50548
LinkDB
All DBs
Position
808559..812734
Genome browser
AA seq
1391 aa
AA seq
DB search
MNLLNLFNPLQTAGMEEEFDAIKIGIASPETIRSWSYGEVKKPETINYRTFKPERDGLFC
AKIFGPVKDYECLCGKYKRLKFKGVTCEKCGVEVTLSKVRRERMGHIELAAPVAHIWFLK
SLPSRLGMVLDMTLRDIERVLYFEAFVVTDPGMTPLQRRQLLTEDDYYNKLDEYGDDFDA
KMGAEGIRELLRTLDVAGEIEILRQELESTGSDTKIKKIAKRLKVLEAFHRSGMKLEWMI
MDVLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLELHAPDIIVRNEKRM
LQEAVDSLLDNGRRGKAMTGANKRPLKSLADMIKGKGGRFRQNLLGKRVDYSGRSVITVG
PYLRLHQCGLPKKMALELFKPFIFHKLEKQGLASTVKAAKKLVEQEVPEVWDILEEVIRE
HPIMLNRAPTLHRLGIQAFEPILIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLSLEAQM
EARTLMLASNNVLSPANGEPIIVPSQDIVLGLYYMTRDRINAKGEGSLFADVKEVHRAYH
TKQVELGTKITVRLREWVKNEAGEFEPVVTRYETTVGRALLSEILPKGLPFEYINKALKK
KEISKLINASFRLCGLRDTVIFADHLMYTGFGFAAKGGISIAVDDMEIPKEKAALLAEAN
AEVKEIEDQYRQGLVTNGERYNKVVDIWGRAGDKIAKAMMDNLSKQKVIDRDGNEVDQES
FNSIYMMADSGARGSAAQIKQLSGMRGLMAKPDGSIIETPITSNFREGLTVLQYFIATHG
ARKGLADTALKTANSGYLTRRLVDVTQDLVVVEDDCGTSDGFVMKAVVQGGDVIEALRDR
ILGRVTASDVVDPSSGETLVEAGTLLTEKLVDMIDQSGVDEVKVRTPITCKTRHGLCAHC
YGRDLARGKLVNAGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASRAAAASQVEAKSNGTA
RFSSQMRYVANNKGELVVIGRSCEVVIHDDIGRERERHKVPYGAILMVQDGEAIKAGQTL
ATWDPHTRPMITEHAGWVKFENVEEGVTVAKQTDDVTGLSTLVVIDGKRRSGSASKLLRP
TVKLLDENGLEICIPGTSTPVSMAFPVGAVITVREGQEVGKGDVLARIPQASSKTRDITG
GLPRVAELFEARVPKDAGMLAEITGTVSFGKETKGKQRLIITDVDGVAYETLISKEKQIL
VHDGQVVNRGETIVDGAVDPHDILRLQGIEALARYIVQEVQEVYRLQGVKISDKHIEVII
RQMLRRVNIVDSGETEFITGEQVERGDVMTANEKALEEGKEPARYENVLLGITKASLSTD
SFISAASFQETTRVLTEAAIMGKQDELRGLKENVIVGRLIPAGTGLTYHRSRRQQWQEAE
QEASEIEATDE
NT seq
4176 nt
NT seq
+upstream
nt +downstream
nt
atgaatttgttgaacttatttaatccgttgcaaactgccggcatggaagaagagtttgat
gccatcaaaatcggcattgcttctcccgaaaccattcgttcatggtcttacggcgaagtt
aaaaagcctgaaaccatcaactatcgtacgttcaaacctgagcgtgacggtctgttctgc
gccaaaatctttggtccggtcaaagactacgagtgcttgtgcggaaaatataaacgcttg
aaatttaaaggtgtaacctgtgaaaaatgtggcgtggaagtgactttgtccaaagtgcgc
cgcgaacgcatgggtcatatcgaattggccgcgcctgtggcacacatttggttcttgaaa
tccctgccttctcgtttgggtatggtgctggacatgactttgcgcgacattgaacgcgta
ttgtactttgaagcatttgttgtgaccgaccccggcatgactccgctgcaacgccgtcaa
ttgctgactgaagatgactactacaacaaactggacgaatacggcgacgatttcgatgcc
aaaatgggtgcggaaggtatccgcgaattgttgcgcaccttggatgtagcaggcgaaatc
gaaatcctgcgccaagagcttgagtcgaccggttcagataccaaaatcaaaaaaatcgcc
aaacgcttgaaagtgttggaagccttccaccgttccggtatgaaactggagtggatgatt
atggacgtgctgccggtattgccgcctgatttgcgtcctttggttccgttggatggcggt
cgttttgccacttccgatttgaacgatttataccgtcgcgtcatcaaccgtaacaaccgt
ctgaaacgcctgctggaactgcacgctcctgacatcattgttcgcaacgaaaaacgtatg
ttgcaagaagcggttgactcgctgttggataacggccgtcgcggtaaagccatgaccggc
gccaacaaacgtccgctgaaatcgttggcagacatgattaaaggtaagggcggtcgtttc
cgtcaaaacctgctgggtaaacgtgtggactactctggtcgttccgtgattaccgtaggt
ccatacctgcgtctgcaccaatgtggtttgccgaaaaaaatggctttggaactgttcaaa
ccgttcattttccataaactggaaaaacaaggtctggcttctaccgttaaagcagcgaaa
aaattggtagagcaagaagtaccggaagtatgggacattttggaagaagtcatccgcgaa
catccgattatgctgaaccgtgcgccgaccctgcaccgtttgggtattcaagcgtttgaa
cctatcctgattgaaggtaaagccattcagttgcatccgttggtatgtgccgcgtttaac
gccgactttgacggtgaccaaatggcggtacacgttccattgagcttggaagcgcaaatg
gaagcgcgcaccttgatgctggcttcaaacaacgtattgtctcctgcaaacggtgaaccg
attatcgtaccttcccaagacatcgtattgggcctgtactacatgactcgcgaccgcatc
aatgctaaaggtgagggtagcctgtttgctgatgtgaaagaagtgcatcgtgcataccat
accaaacaggttgagctgggtacgaaaatcaccgtacgtctgcgtgaatgggtgaaaaac
gaagccggtgaattcgagccagtcgttacccgttacgaaacgactgtcggtcgtgcattg
ttgagcgaaatcctgcctaaaggcttgcctttcgagtacatcaacaaagcgctgaagaaa
aaagaaatttccaaactgattaacgcatcgttccgcctgtgcggcttgcgcgatacggtt
attttcgccgaccacttgatgtatactggtttcggattcgcagccaaaggcggtatttcc
attgctgttgacgacatggaaattccgaaagaaaaagcagccttgttggctgaagccaat
gccgaggttaaagaaatcgaagaccaataccgtcaaggtttggtcaccaacggtgaacgc
tacaacaaagtggtggatatttggggtcgtgccggcgataaaatcgctaaagcgatgatg
gacaacttgtccaagcaaaaagttatcgaccgtgatggcaacgaagtcgatcaagagtca
tttaactccatctatatgatggcagactccggtgcccgtggttctgcggctcagattaaa
cagttgtctggtatgcgtggcttgatggcaaaaccagacggctcgattattgaaacgccg
attacctcaaacttccgcgaaggtctgactgtattgcaatactttattgcgacccacggt
gcgcgtaagggtttggcggataccgcattgaaaaccgcgaactccggttacctgacccgt
cgtctggtagacgtaactcaagacttggtcgttgttgaagacgattgtggtacttcagac
ggctttgttatgaaagcggtcgtacagggcggtgatgtgattgaagcattgcgcgatcgt
attttgggtcgtgttaccgcgtctgacgttgtcgatccgtcaagtggcgagaccttggtt
gaagccggtacgttgttgacggaaaaactggtggatatgattgatcaatccggtgtggat
gaggtcaaagtccgtaccccgattacttgtaaaacccgccatggcttgtgtgcgcactgt
tacggtcgcgacttggcacgcggcaaactggttaatgccggtgaagcagttggcgtgatt
gccgctcagtctatcggtgaaccgggtacccagttgaccatgcgtacgttccacatcggt
ggtgcggcatcccgtgcggcagcagccagccaagttgaagccaaatccaacggtacggca
cgattcagcagccaaatgcgttatgttgccaacaataaaggcgaattggttgtcatcggt
cgctcttgcgaagtagttatccatgatgacatcggccgtgaacgcgaacgccacaaagtg
ccttacggtgcgatcttgatggttcaagatggtgaagccattaaagccggtcaaacgttg
gcaacttgggatccgcatacccgtccgatgattaccgaacacgcaggttgggtgaaattc
gaaaatgttgaagagggtgtaaccgttgccaaacaaactgacgatgtaaccggtttgtct
accttggtggttatcgacggcaagcgccgttccggcagcgcatccaaactgcttcgtcct
actgtaaaattgttggatgaaaacggtctggaaatctgtattccaggtacctccaccccg
gtatctatggcattccctgtgggtgcagtgattaccgtgcgcgagggtcaggaagtcggt
aaaggcgacgtattggcgcgtatcccgcaagcctcttccaaaacccgcgatattaccggt
ggtctgccgcgcgttgccgagctgtttgaagcacgcgtgccgaaagatgcaggtatgctg
gcagaaattaccggtaccgtttcattcggtaaagagaccaaaggcaaacagcgtctgatt
atcactgatgtagacggcgtagcatacgagactttgatttccaaagagaaacaaattctg
gtgcacgacggtcaagtggtaaaccgcggtgaaaccatcgtagacggagcggtagatccg
catgatattctgcgtctgcaaggtatcgaagcactggcgcgttatatcgttcaagaggtg
caagaggtttaccgtcttcaaggcgtgaagatttccgataaacacatcgaagtcatcatc
cgtcagatgctgcgccgtgtgaatattgtcgattcaggtgaaaccgaattcattaccggt
gagcaagtcgaacgcggcgatgtcatgaccgccaatgaaaaagctttggaagaaggcaaa
gaaccggcacgttacgaaaatgtattgttgggtattaccaaagcctccttgtcaaccgac
agctttatttctgccgcatcgttccaagaaacgacccgcgttctgaccgaagccgccatt
atgggcaagcaagacgagttgcgcggtctgaaagagaacgtaatcgtaggtcgtctgatt
cctgccggtaccggtttgacctaccaccgcagccgccgccagcaatggcaggaagcagag
caagaagcttccgaaatcgaagcaacagatgaataa
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