Neisseria mucosa FDAARGOS_260: A6J88_06095
Help
Entry
A6J88_06095 CDS
T04958
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
nsi
Neisseria mucosa FDAARGOS_260
Pathway
nsi03420
Nucleotide excision repair
nsi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
nsi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
A6J88_06095 (uvrD)
03430 Mismatch repair
A6J88_06095 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nsi03400
]
A6J88_06095 (uvrD)
Enzymes [BR:
nsi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
A6J88_06095 (uvrD)
DNA repair and recombination proteins [BR:
nsi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
A6J88_06095 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
A6J88_06095 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
AAA_12
Viral_helicase1
DUF3553
YccV-like
Motif
Other DBs
NCBI-ProteinID:
ARC50852
LinkDB
All DBs
Position
1199395..1201602
Genome browser
AA seq
735 aa
AA seq
DB search
MFSESSSAALLQGLNPEQLSAVTWPPQSALVLAGAGSGKTRVLTTRIAWLLQTGQASVHS
IMAVTFTNKAAKEMQTRLGAMIPINVRAMWLGTFHGLCHRFLRLHHRDAGLPSSFQILDN
GDQLSLIKRLLKSLNIAEEIIAPRSLQGFINAQKESGLRASVLSAPDPHTSRMIECYAEY
DKICQREGVVDFAELMLRSYEMLQSNEILRQHYQNRFNHILVDEFQDTNKLQYAWLKLMA
GGNAAVFAVGDDDQSIYRFRGAHVGNMTALMEEFHIDAPVKLEQNYRSVGNILAAANAVI
ENNDERLGKNLRTDAEAGDKIRYYSAFTDLEEAQFIVDETKALEREGWDLDEIAVLYRSN
AQSRVIEQSLFRSGIPYKIYGGLRFYERQEIKHALAYLRLAVNPDDDNALLRVINFPPRG
IGARTVENLQTTSSEQGITLWQAACNAGAKAGKVAAFVRLIEALRNQVGQLPLPEIIVGI
LKDSGLTEHYRTQKGDNQDRLDNLDELVNAAIEFKPEDSNFEILPDNISDDPAFPILAFL
SNAALESGENQAGAGEKAVQLMTVHAAKGLEFNAVFLTGMEEGRFPSEMSLAERGGLEEE
RRLMYVAITRARKRLYITMAQQRMLHGQTQFGIVSRFVEEIPPEVLHYLSVKKPAYDSYG
NTRQTAAPKDKIIDDYKQPQTYAGFRIGQNVRHAKFGTGVIIDAVDKGESARLTINFGKQ
GVKELDTKFAKLEEM
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atgttttccgagtcctcttccgcagccctcctgcaaggcttaaaccccgaacaactctcc
gccgtaacctggccaccgcaatccgccctcgttttggcgggcgcgggcagcggcaaaacg
cgcgtgctgaccacgcgcatcgcatggctgttgcaaaccggtcaggcaagcgtacacagc
attatggcggtaacgtttaccaacaaagccgccaaagaaatgcaaacccgtcttggcgca
atgattcccatcaacgtccgcgccatgtggctcggcacgtttcacggtctctgccaccgc
ttcctacggctgcaccaccgcgatgccggtctgccgtcttcctttcaaatcctcgacaac
ggcgaccagctttcccttatcaaacgcctgctcaaaagtctcaacatcgccgaagaaatc
atcgcgccgcgttcgctgcaaggctttatcaatgcgcaaaaagaatccggtttgcgcgct
tccgtgttgagcgcgcccgacccgcacacaagccgcatgattgaatgctacgccgaatac
gacaaaatctgccaacgcgaaggcgtggtcgatttcgccgaactcatgctccgcagctac
gaaatgctgcaaagcaacgaaatcctgcgccagcactatcaaaaccgcttcaaccacatt
ctcgtcgacgagttccaagacaccaacaagctgcaatacgcgtggctcaaactcatggcg
ggcggcaacgcggcagtgtttgccgtcggcgacgacgaccaaagcatctaccgattccgc
ggcgcgcacgtcggcaacatgaccgcgctgatggaagagttccacatcgacgcgcccgtc
aaactcgaacaaaactaccgctccgtcggcaacatcctcgccgccgccaacgctgttatc
gaaaacaacgacgaacgcctcggcaaaaacctgcgtaccgatgccgaagcaggcgacaaa
atccgctactactccgcctttaccgacctcgaagaagcccaattcatcgtggacgaaacc
aaagccctcgaacgcgaaggctgggatttggacgaaatcgccgtcctctaccgcagcaac
gcccaatcccgcgtcatcgaacaaagcctgttccgcagcggcatcccctacaaaatctac
ggcggactgcgcttttacgaacgccaagaaatcaaacacgcgctcgcctacctgcgcctc
gccgtcaatcccgacgacgacaacgccctcttgcgcgtcatcaacttcccgccgcgcggc
atcggcgcgcgtactgtcgaaaaccttcagacgacctcaagcgaacaaggcatcaccctc
tggcaggcagcctgcaacgccggcgcaaaagccggcaaagtcgccgccttcgtccgcctg
attgaagccctgcgcaaccaagtcggacaactgcccctgcccgaaatcatcgtcggcatc
ctcaaagacagcggcctgaccgaacactaccgaacccaaaaaggcgacaaccaagaccgc
ctcgacaacctcgacgaactcgtcaacgccgccatcgagttcaaacccgaagacagcaac
ttcgaaatcctgcccgacaacatttcagacgaccccgccttccccatcctcgccttccta
agcaatgccgccctcgaatccggcgaaaaccaagcaggcgcgggcgaaaaagccgtccaa
ctcatgaccgtccacgccgccaaaggcttggaattcaacgccgtcttcctcaccggcatg
gaagaaggccgcttccccagcgaaatgagccttgccgaacgcggcggcctcgaagaagaa
cgccgcctcatgtacgtcgccatcacccgcgcccgcaaacgcctctacatcaccatggcg
caacagcgcatgctgcacggacaaacccaattcggcatcgtctcccgcttcgtcgaagaa
atcccacccgaagtattgcactacctgtccgtcaaaaaacctgcctacgacagctacggc
aacacacgccaaaccgccgcgcccaaagacaaaatcatcgacgactacaaacagccccaa
acctacgcaggcttccgcatcggacaaaacgtccgccacgccaaattcggcaccggcgtc
atcatcgatgccgtggacaaaggcgaatccgcccgactgaccatcaacttcggcaaacag
ggcgtaaaagagctggataccaagtttgcgaaattggaagagatgtga
DBGET
integrated database retrieval system
