Neisseria mucosa FDAARGOS_260: A6J88_08755
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Entry
A6J88_08755 CDS
T04958
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
nsi
Neisseria mucosa FDAARGOS_260
Pathway
nsi03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
nsi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
A6J88_08755
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nsi03400
]
A6J88_08755
DNA repair and recombination proteins [BR:
nsi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
A6J88_08755
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
A6J88_08755
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_29
AAA_16
AAA_23
AAA_21
RsgA_GTPase
nSTAND1
AAA_22
AAA_25
DnaJ_CXXCXGXG
nSTAND3
cobW
Viral_helicase1
T2SSE
Motif
Other DBs
NCBI-ProteinID:
ARC51298
LinkDB
All DBs
Position
1757940..1760810
Genome browser
AA seq
956 aa
AA seq
DB search
MCNHHQQNDSKTPHSEARDNDTIRIRGARTHNLKNVDLDIPRHKLVVVTGLSGSGKSSLA
FDTLYAEGQRRYVESLSAYARQFLQMMDKPDVDLIEGLSPAISIEQKSTSHNPRSTVGTV
TEIHDYLRLLYARVGTPYCPEHNLPLSSQTVSQMVDAVLKLPEDTRVMILAPAVRERKGE
FVDFFADLQAQGFARVRVDGEVYQLDEVPKLEKNIKHNIDVVIDRVKVKADIKQRLAESF
ETALRHGNERALAMEMDSGEEHWFSARFACPVCSYSLPELEPRLFSFNNPMGSCPTCDGL
GNTNFFDPEKVVAHPELSLATGAIDGWDKRNQFYFQMIQSLARHYGFDVQAAWETLPEKV
KKVVLHGSGKEVIDFKYLSERGTTFNRSHAFEGIIPNLERRYRETDSETVREKLREYQNH
RACPSCGGARLRKEARYVYVSGEPLHEVSAWPLTKTHQFFETLDLDGNKKQIAEKILKEI
TERLGFLINVGLDYLNLSRSAETLSGGEAQRIRLASQIGSGLTGVMYVLDEPSIGLHQRD
NDRLLATLKRLRDLGNSVIVVEHDEDAIREADFVVDMGPGAGEHGGNVLIADTPENVAKC
EKSVTGQYLSGKKSIAVPSERTPVNPDRMLVLKGARGNNLKNVTLELPLGLITCITGVSG
SGKSTLINDTLAKITARELNRAQEEPAPYDDIHGLEHLDKVINVDQSPIGRTPRSNPATY
TGLFTPIRELFAGVPLSRERGYNVGRFSFNVKGGRCEACQGDGVIKVEMHFLPDVYVPCE
VCHGKRYNRETLEIQYKGKNISQVLDMTVEEAREFFDAVPTVSRKLQTLMDVGLGYIRLG
QSATTLSGGEAQRVKLALELSKRDTGRTLYILDEPTTGLHFADIALLLEVIGRLKGKGNS
IVIIEHNLDVIKTADWIVDLGPEGGDGGGRIVAEGTPEEVGQIKVSYTGFYLNKIL
NT seq
2871 nt
NT seq
+upstream
nt +downstream
nt
atgtgtaaccaccatcagcaaaacgacagcaaaactccccactcagaagcccgcgacaac
gacaccatccgcatccgcggcgcgcgcacgcataatttgaaaaacgtcgatttggacatt
ccgcgccacaagctggtggtggtaacggggctgtcgggcagcggcaagtcgtcgctggcg
tttgacacgctgtatgccgaagggcagcggcgttatgtcgagagcctgtccgcctatgcg
cggcagtttttgcagatgatggacaagcccgatgtcgatttgatcgaaggcctgtcgccc
gcgatttccatcgagcaaaaatccaccagccacaacccgcgctccaccgtcggcacggtt
acggaaatccatgattacttgcgtcttttgtacgcccgcgtcggcacgccgtattgcccc
gaacacaatctgccgctatccagccagaccgtgtcgcagatggtcgatgccgtgttgaag
ctgccggaagacacgcgcgtgatgattctggcgccggcggtacgcgagcgtaagggcgaa
tttgtcgatttctttgccgacttgcaggcacagggttttgcgcgggtgcgcgtggacggc
gaagtctatcagttggacgaagtgccgaagctggaaaaaaacatcaaacacaacatcgac
gtagtcattgaccgcgtgaaagtgaaggcggacatcaagcagcggctggcggaaagtttt
gaaaccgcgctgcgccacggcaacgagcgcgcactggcgatggaaatggacagcggcgaa
gaacattggttttccgcgcgtttcgcctgccccgtgtgttcgtacagcctgcccgaattg
gagccgcgccttttttcgttcaacaatccgatgggctcctgcccgacttgcgacggcttg
ggcaacaccaatttcttcgaccctgaaaaagtggtcgcccaccccgaattgtcgctggca
acgggcgcgattgacggctgggacaagcgcaaccagttctatttccaaatgattcagtcg
ctggcgcggcattatggtttcgatgtgcaggctgcttgggaaacgctacctgaaaaagtc
aaaaaagtcgtattacacggctcgggcaaagaagtcattgatttcaaatacttatccgaa
cgcggcactaccttcaaccgcagccacgccttcgaaggcatcatccccaatctcgaacgc
cgctaccgcgaaaccgacagcgaaaccgtgcgcgaaaaactgcgcgaataccaaaaccac
cgcgcctgcccaagctgcggcggcgcacgtttgcgcaaagaagcccgctatgtttacgtc
agcggcgaaccgttgcacgaagtctccgcctggccgctgaccaaaacccaccaattcttt
gaaacgctggatttggacggcaacaaaaaacaaatcgccgaaaaaatcctcaaagaaatc
accgagcggctcggcttcctgattaacgtcgggctggattacctgaatctctcccgctcc
gccgaaaccctctccggcggcgaagcccagcgcatccgcctcgccagccaaatcggcagt
ggcctgaccggcgtgatgtacgttttggacgaaccctccatcggcctgcaccagcgcgac
aacgaccgcctgctcgccaccctcaaacgcctgcgcgatttgggcaacagcgtgattgtg
gtcgaacacgacgaagacgccatccgcgaggctgatttcgtcgtcgatatgggccccggc
gcaggcgaacacggcggcaacgtactgattgccgacacgcccgaaaacgtcgccaaatgc
gaaaaatccgttaccggacaatacctcagcggtaaaaaatccattgccgtgccgtctgaa
cgcacgcccgtcaatcccgaccgaatgctcgtcctcaaaggcgcgcgcggcaacaacctc
aaaaacgtaaccctcgaactgccgctcggtttgattacctgcatcaccggcgtatccggc
agcggcaagtccaccctgattaacgacaccctcgccaaaatcaccgcccgcgaactcaac
cgcgcccaagaagaacccgccccatacgacgacatccacggcctcgaacacctagacaaa
gtcatcaacgtcgaccaatcccccatcggccgcaccccgcgctccaatcccgccacctac
accggcctgttcacccccatccgcgaactcttcgccggcgtccccctctcgcgcgaacgc
ggctacaacgtcggcagattctccttcaacgtcaaaggcggccgctgcgaagcctgccaa
ggcgacggcgtgattaaagtcgaaatgcacttcctgcccgacgtgtacgtcccctgcgaa
gtctgccacggcaaacgctacaaccgcgaaacgctcgaaatccaatacaaaggcaaaaac
atcagccaagtcctcgacatgaccgtcgaagaagcccgcgaatttttcgacgccgtcccc
accgtatcgcgcaaactgcaaaccctgatggacgtgggcctgggctacatccgcctcgga
caatccgccaccaccctctccggcggcgaagcccagcgcgtcaagctcgccttggaactc
tccaaacgcgacaccggcagaacactctacatcctcgacgaacccaccaccggcctgcac
ttcgccgacatcgccctgctgctggaagtcataggccgcctgaaaggcaaaggtaactcg
attgtgattattgagcataatttggacgtgattaaaactgcggattggattgtcgactta
gggccggaaggcggtgatggtggggggaggattgtggcggaggggacgccagaagaggtg
ggacaaattaaagttagttatactggtttttatttgaataagattttataa
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