Neisseria mucosa FDAARGOS_260: A6J88_11400
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Entry
A6J88_11400 CDS
T04958
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
nsi
Neisseria mucosa FDAARGOS_260
Pathway
nsi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nsi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
A6J88_11400 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nsi03400
]
A6J88_11400 (recD)
Enzymes [BR:
nsi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
A6J88_11400 (recD)
DNA repair and recombination proteins [BR:
nsi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
A6J88_11400 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
AAA_11
UvrD_C_2
Viral_helicase1
SH3_13
NAT10_TcmA_helicase
AAA_22
UvrD-helicase
SLFN-g3_helicase
AAA_16
T2SSE
FtsK_SpoIIIE
nSTAND3
SRP54
NTPase_1
AAA
TrwB_AAD_bind
AAA_5
UvrD_C
AAA_24
ATPase
AAA_28
Motif
Other DBs
NCBI-ProteinID:
ARC51727
UniProt:
A0ABM6JDY0
LinkDB
All DBs
Position
complement(2308363..2310120)
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AA seq
585 aa
AA seq
DB search
MAENTADDLNLAAAQAAGHLLERCVPEHAAVLTPYVLRLFAALQNGHSFVWLDEGEAEEL
AGLAPTVGQSASPLVLQGKKLFLGRMWQLEHDLTAEIKRLAEAEVEPVDWMSASQNLSGW
FADKGSAGQRDAAGLALLQAFMLITGGPGTGKTTTVAKLLGLICTNSATRLPRIALAAPT
GKAAAHMARALHRAVDGFEIPDAVRNHLSALEGQTVHRLLKLRPPQMLPAFDGNRPLPLD
VLVVDEASMLDVSLLLHLLRAIPSGCRVIFLGDEFQLPSVGVGAVLAALSRRTVLDKETA
EQLSIYLPEHGFPVEENPPALSQNVAQLKVSHRFGADSGIGCLARAVVSGKSGEGWVQFA
LFPDELEIREGRLKQQAELLYRKHEKYWQAVDKNDVALAFGHAADVVVLAAWRQDAEAFN
EEYCRYLQRKHRAGADTPWFAGQIIMIARNDYTLEVFNGDIGLIMPDAESANGLAAYFLN
ADGFKKIAISRLPQFDSAFAMTVHKSQGSEYREVWLLPPSGKIEQGGDDALSGLNNALLY
TAITRARERFVFWGNEEQWRMAVETRKTRRTALGDILDAMFVPKA
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atggctgagaatactgccgatgatttgaaccttgccgccgcacaagcggccgggcatttg
ctggagcgttgcgtaccggagcatgctgcggtgctgacgccttatgtgttgcggctgttt
gcggctttgcagaacgggcattcgtttgtgtggctggatgagggcgaggcggaggaattg
gcgggattggcgccgacggtcgggcagagcgcgtcgccgttggtgttgcagggcaaaaag
ctgtttttggggcggatgtggcaactcgagcatgatttgacggctgaaatcaagcgtttg
gcagaagcggaagtcgagcctgtggattggatgagcgcgtcgcaaaacttgtccggctgg
tttgccgacaaaggcagcgcagggcagcgggatgcggcggggcttgccctgcttcaagcg
tttatgttgattacgggcgggccaggtacgggtaaaacgacgactgtggcgaaacttttg
gggctgatttgcaccaactctgccacgcgcctgccgcgtatcgctctggccgcgccgacg
ggcaaggctgcggcgcatatggcgcgcgcgctgcatcgtgcggtggacggtttcgagata
cctgacgcggtgcgcaatcacttgtccgcgctggaaggacagacggtccaccgccttttg
aaactgcgcccgccgcaaatgctgcctgcgtttgacggcaatcgcccgctgcctttggat
gtattggtggtggatgaggcttcgatgttggatgtttccctgctgcttcacttgctgcgt
gcgattccgtcgggctgccgcgtgatttttttgggtgatgagttccaactgccttcggtc
ggtgtcggcgcggtgttggcggcgttgtcgagacggacggttttggataaggagacggcg
gagcaactgagtatttatctgccggaacacggtttccccgtggaggaaaatccgccggct
ttgtcgcaaaacgtcgcgcaactgaaggtcagccaccgtttcggcgcagacagcggcatc
ggttgcttggcgagggcggtcgtatcgggcaagagcggggaaggttgggtgcagtttgcc
ttgttccccgacgagctggaaatccgcgaaggtcgtctgaaacagcaggcggagctgctt
taccgcaaacacgaaaaatactggcaggcagtcgataaaaacgatgtggcgctggcgttc
ggacacgcggcggatgtggtcgttttggcggcatggcggcaggacgcggaggcgttcaac
gaagagtattgccgttatctgcaacgcaaacatcgggcgggcgcggatacgccgtggttc
gcggggcaaatcatcatgattgcgcgcaacgactatacgctggaagtgttcaacggcgac
atcgggctgattatgcccgacgcggaatcggcgaacggcttggcggcgtattttctgaat
gcggacggtttcaaaaaaatcgccatcagccgcctgccgcagtttgattccgcgttcgcc
atgactgtgcataaaagccagggttcggaatatcgggaagtctggctgctgccgccgtcg
gggaaaatagagcagggcggggatgacgcgctgtcgggcttaaacaatgcgcttctctac
accgccatcacccgcgcacgggaacgcttcgtcttttggggaaatgaagagcaatggcgg
atggcggtggaaacccgcaaaacccgccgcacggcattgggcgacatcttggacgcgatg
ttcgtgccgaaagcttga
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