Nocardia mangyaensis: BOX37_06765
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Entry
BOX37_06765 CDS
T04582
Name
(GenBank) recombinase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
nsl
Nocardia mangyaensis
Pathway
nsl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nsl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BOX37_06765
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nsl03019
]
BOX37_06765
03400 DNA repair and recombination proteins [BR:
nsl03400
]
BOX37_06765
Enzymes [BR:
nsl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BOX37_06765
Messenger RNA biogenesis [BR:
nsl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BOX37_06765
DNA repair and recombination proteins [BR:
nsl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BOX37_06765
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_30
RecQ_Zn_bind
Motif
Other DBs
NCBI-ProteinID:
APE33718
UniProt:
A0A1J0VNX1
LinkDB
All DBs
Position
complement(1507180..1509312)
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AA seq
710 aa
AA seq
DB search
MTTMTSAAGNDVLDLTAPDLRERAEELLGELAGPDARLREDQWTAIEALVVQRRRALVVQ
RTGWGKSAVYFIAAKLLRGAGRGPTVIVSPLLALMRNQVAAAERAGVVAATINSGNVTEW
DEIHQRVADGAVDVLLVSPERLNNPDFRDQVLPRLAADAGLVVIDEAHCVSDWGHDFRPD
YRRIRTLIADLGSDVPVLATTATANDRVVTDVAGQIGTDTLVLRGTLDRESLHLSVVRFD
DAVQRTAWLGAQLHRLPGSGIIYCLTVAAANDLADVLNSHGHTVAAYTGQSDPAEREMLE
GALLNNEVKALIATSALGMGFDKPDLGFVVHVGAPSSPIAYYQQVGRAGRGTERAEVVLL
PGPEDARIWSYFASVAFPREHIVRAVLAALDTDRPLSTVALEPMVELNRSRLEMVLKVLD
VDGAVRRVRGGWLSTGQPWTYDTERYERLAAARDAEQQAMVDYQATSTCRMTFLRRQLDD
PGLAALDATTPDCGRCDNCTGVSPDTTVDEAAVTATRARLDRPGLDLTPRKQWPSGMAKL
AVPLSGKITEGAETGRVLGRLTDLGWGQRLRALLDGPDAPVPDAVFDACIAVLRDWDWVQ
RPRSVLAMESPSHPRLTESLAQRLAQVGRLDHLGTLHTRPDRPPVSAANSAHRVAGLFDS
WEVPDLTAVEGPILLVDARTDTGWTLTIAAHALRRSGADAVLPFALATPT
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atgaccaccatgacctcagccgcaggcaacgacgtgctcgacctgactgctcccgacctg
cgcgaacgtgccgaggagctgctcggagagctcgccggaccggacgcgcggctgcgggag
gaccagtggacggcgatcgaggccctggtggtgcagcgcaggcgggcgctggtggtgcag
cggaccggctggggcaagtcggcggtatacttcatcgccgccaagctgctgcgcggtgcc
gggcgcgggcccacggtgatcgtgtcgccgctgctggcgctgatgcgcaaccaggtggcc
gcggccgagcgggccggggtggtggcggccacgatcaactccggcaatgtcaccgagtgg
gacgagatccatcagcgggtcgccgacggggcggtcgacgtgctgctggtgagcccggag
cggttgaacaatcccgacttccgtgatcaggtgctgccgcggctggccgccgacgccggg
ctggtcgtcatcgacgaggcgcactgcgtctcggactggggtcacgacttccggcccgac
taccgccgtatccgcaccctgatcgccgatctcgggtcggacgtgccggtgctggcgacc
accgcgacggccaacgaccgggtcgtcaccgatgtggctggccagatcggcaccgacacc
cttgtgctgcgcggcaccctggaccgggagtcgctgcacctgtcggtggtgcggttcgac
gacgcggtccagcgcacggcctggctcggtgcgcagctccatcggctgcccggttcgggc
atcatctactgcctcaccgtggccgccgccaacgacctggccgacgtgctgaactcccac
ggtcacaccgtcgccgcctacaccgggcagtccgacccggccgaacgcgagatgctcgag
ggcgcgctgctgaacaacgaggtcaaggcgctgatcgcgacctcggcgctcggcatgggt
ttcgacaaacccgatctggggttcgtcgtgcacgtcggcgccccgtcctcgccgatcgcc
tactaccagcaggtcggtcgcgcgggtcgtggcaccgagcgggccgaggtggtgttgctg
cccggacccgaggacgcgcggatctggagctacttcgcctcggtggcgtttccgcgggaa
cacatcgtgcgagcggtgctcgccgcactcgacaccgaccgaccgctgtcgacggtggcg
ctggaaccgatggtcgagctcaaccgatcgcggctggagatggtgctcaaggtgctcgac
gtggacggcgcggtgcgccgggtacgcggcggctggctgtccaccggtcagccgtggacc
tacgacaccgagcgctacgaacggctggccgcggcgcgcgacgccgaacaacaggcgatg
gtcgactaccaggcgacgagcacctgccggatgaccttcctgcgccgtcaactcgacgac
cccggtctggccgcgctcgacgccaccacaccggactgcgggcgctgcgacaactgcacc
ggcgtcagccccgacaccaccgtcgacgaagccgctgtcaccgccacccgagcacgcctg
gaccgccccggcctcgacctgaccccgcgcaaacagtggcccagcggcatggccaagctc
gcggttccgctgtccggcaagatcaccgagggcgccgagacgggtcgagtgctcggcagg
ctcaccgacctcggctggggtcagcggctgcgcgccctgctcgacggtcccgacgcgccc
gtgcccgatgccgtcttcgacgcgtgtatcgcggtcctgcgtgattgggactgggtgcag
cgcccgcgctcggtgctggcaatggagtcacccagccacccgcggctcaccgagagcttg
gcgcaacggctcgcccaggtcggtcgcctcgatcacctgggcaccctgcacaccaggccc
gaccgtccgccggtgtcggccgcgaactccgcgcatcgggtggcagggctgttcgactcg
tgggaggtcccggacctgactgccgtcgagggcccgatcctgctcgtggacgcgcgtacc
gataccggctggaccctcaccatcgccgcacacgccctgcgccgcagcggcgccgacgcg
gttctgcccttcgccttggccaccccgacctga
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