KEGG   Nocardia mangyaensis: BOX37_06775
Entry
BOX37_06775       CDS       T04582                                 
Name
(GenBank) RNA-splicing ligase RtcB
  KO
K14415  tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8]
Organism
nsl  Nocardia mangyaensis
Brite
KEGG Orthology (KO) [BR:nsl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:nsl03016]
    BOX37_06775
Enzymes [BR:nsl01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.8  3'-phosphate/5'-hydroxy nucleic acid ligase
     BOX37_06775
Transfer RNA biogenesis [BR:nsl03016]
 Eukaryotic type
  tRNA spricing factors
   tRNA splicing ligase complex
    BOX37_06775
 Prokaryotic type
   tRNA splicing ligases
    BOX37_06775
SSDB
Motif
Pfam: RtcB
Other DBs
NCBI-ProteinID: APE33720
UniProt: A0A1J0VNV7
LinkDB
Position
complement(1509949..1511160)
AA seq 403 aa
MFPVELRGTRAQTLMWANEHEIEQSALRQLRNIAELEWVHGLRVMPDVHLGKGATVGSVI
AMRAAVAPAAVGVDIGCGMESVKTGLTAADLPDDLRSLRSRIERAVPVGFNAHRDAVNVT
ALHAGSHGQSARTKGWERFWRTFADLHPGVSSLESRAHKQIGSLGGGNHFIEVCLDQDDA
VWILLHSGSRNIGKELAERHMAVARALPHNQSLPDRDLAVFLSGTPEMAAYRRDLTWAQE
YAARNRAVMLALVCRAVREEFAEREVRFDEPISCHHNYVAEEIIDGVPMLVTRKGAVRAG
DGDLALIPGSMGTRSYVVRGKGNPASFQSASHGAGRRLSRTAAKKQYTVADLVAQTEGVE
SRKDAGVVDEIPAAYKDIDEVIAAQSDLVDVVATLRQVLCVKG
NT seq 1212 nt   +upstreamnt  +downstreamnt
atgtttcccgtcgagctgcgcggtaccagggcgcagacgctcatgtgggccaacgagcac
gagatcgagcagtccgcgctgcgtcagctccgcaatatcgcggagctggaatgggtgcac
ggactgcgcgtgatgcccgatgtgcacctgggcaaaggcgcgacggtgggctcggtcatc
gccatgcgggctgccgtcgctccggctgcggtcggggtggacatcggctgcgggatggag
agcgtcaagacggggctgacggccgccgatctgcccgatgacctgcgatcgctgcggtcg
cggatcgagcgggccgtgccggtcgggttcaacgcgcaccgcgacgccgtgaatgtcacg
gcgctgcacgccggttcgcacgggcagtcggcgcggaccaagggctgggagcggttctgg
cgcacattcgccgacctgcaccccggggtgtcgtcgctcgagtccagggcgcacaagcag
atcggctcgctcggcggcggcaaccatttcatcgaggtctgcctcgaccaggacgacgcc
gtctggatcctgctgcactccggatcccgcaacatcggcaaggagctggccgagcggcac
atggcggtggcgcgggcgctgccacacaaccagtcgctgcccgatcgcgatctggccgtg
ttcctttccgggacaccggagatggcggcctaccggcgtgatctcacctgggcgcaggag
tacgccgcgcgcaaccgggcggtgatgctggcgctggtgtgccgggcggtgcgcgaggag
ttcgccgagcgcgaggtgcgcttcgacgagccgatctcgtgccaccacaactatgtggcc
gaggagatcatcgacggcgtgccgatgctggtgacccgcaagggcgcggtgcgggccggc
gacggcgatctcgcgctgatcccggggtcgatgggtacccggtcgtatgtggtgcggggc
aagggaaatccggcttcgttccagtcggcctcgcacggcgcgggtcggcggctgagccgg
accgcggccaagaagcagtacaccgtcgcggatctggtcgcccagaccgagggcgtggag
tcgcgcaaggacgcgggtgtggtcgacgagatcccggccgcgtacaaggacatcgacgag
gtgatcgcggcgcagtccgatctggtcgatgtggtcgcgacgctgcgtcaggtgctgtgt
gtgaagggctga

DBGET integrated database retrieval system