KEGG   Nocardia mangyaensis: BOX37_15820
Entry
BOX37_15820       CDS       T04582                                 
Name
(GenBank) RNA polymerase subunit sigma
  KO
K03090  RNA polymerase sigma-B factor
Organism
nsl  Nocardia mangyaensis
Brite
KEGG Orthology (KO) [BR:nsl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:nsl03021]
    BOX37_15820
Transcription machinery [BR:nsl03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     BOX37_15820
SSDB
Motif
Pfam: Sigma70_r4 Sigma70_r2 Sigma70_r3 Sigma70_r4_2 HTH_23 HTH_3 KORA MarR_2 HTH_Crp_2 HTH_31 Trp_repressor HTH_24 HTH_10 HTH_Tnp_4 DUF7343
Other DBs
NCBI-ProteinID: APE35172
UniProt: A0A1J0VT05
LinkDB
Position
3559401..3560240
AA seq 279 aa
MVSTGEATTTQNTTARRSHSRGDSYDNIEPWFEKLRAMPQGDPHYDDLREEVIRLSLPLA
DHIARKFTGRGEQFDDLEQTARVGLVLAVDRYDVSRGSSFLSFAIPTIMGEVRRHFRDHT
WAVRVPRRLKEIQLRIGPATEELSQRLGRLPNARELADELEVDLIEVTRTLVAGNGYQTN
SIDGVTQDDRDNSSQPITDTLGVEEPCYQLTEDAMAVRPLIAALPAEGRRVLIMRFYESR
TQNQIAEALGVSQMQVSRILSRTLRSLRDEALEEHTSVS
NT seq 840 nt   +upstreamnt  +downstreamnt
atggtgagtaccggggaagcgacgacaacccagaacacgacggcacggcggtcacattcg
cgcggcgacagctacgacaacatcgagccgtggttcgagaagctgcgcgccatgccgcaa
ggcgatccgcactacgacgacctccgcgaagaggtcatccggctgagtctgccgctggcc
gatcacatcgcgcgcaagttcaccggacgcggcgagcagttcgacgatctggagcagacg
gcccgggtcgggctggtcctcgccgtcgatcgctacgacgtgagccggggctcctcgttc
ctgtccttcgcgattccgacgatcatgggtgaggtgcgcaggcacttccgtgatcacacg
tgggcggtgcgcgtcccgcgccggctcaaggagatccagctcaggatcggcccggccacc
gaggaactgtcccagcggctgggcaggctgcccaatgcccgcgagctcgccgacgaactc
gaggtcgacctgatcgaggtcacccgcacgctggtcgcgggcaacggctatcagaccaac
tcgatcgatggtgtcacccaggacgatcgggacaactcctcccagcccatcaccgacacc
ctcggtgtcgaggagccctgctatcagctcaccgaggacgcgatggcggtgcgcccgctg
atcgccgcgctgcccgccgaggggcggcgagtgttgatcatgcggttctacgagtccagg
acacagaaccagatcgccgaggctctcggcgtgtcccagatgcaggtctcgcgcatcctg
tcgcgcaccctgcgctcattgcgcgacgaggcactggaagaacacacttccgtgtcgtga

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