Nocardia mangyaensis: BOX37_20315
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Entry
BOX37_20315 CDS
T04582
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
nsl
Nocardia mangyaensis
Brite
KEGG Orthology (KO) [BR:
nsl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nsl03016
]
BOX37_20315
Enzymes [BR:
nsl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
BOX37_20315
Transfer RNA biogenesis [BR:
nsl03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
BOX37_20315
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GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Motif
Other DBs
NCBI-ProteinID:
APE35900
UniProt:
A0A1J0VV22
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All DBs
Position
4529993..4531243
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AA seq
416 aa
AA seq
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MSVAEEPTAAEPLLAPAEGVPPVLATADEVAAAAKSLAAGTGPLAVDAERASGFRYSARA
YLIQLRREGAGSFLIDPIPVTEALTPLAEAINDLEWVLHSADQDLPGLAELGLRPARLFD
TELGGRIAGYERVGLAAMVENLLGRSLRKGHGAADWSTRPLPDEWLNYAALDVELLLELR
DTVAGDLTTQGKMDWAAEEFEHIRTMDPPTPKADRWRRTSGIHTLRRTRQLAIVRELWTT
RDELARARDVAPARILPDSAIVAAATGEPRTIAQLRTLPVFGGPRQRRYSRDWLAAVERA
RTLPDKELPPLTLPFDGPPPVNRWERRDPAAAARLATARSAMGELSTEHSIPVENLLSPD
LVRRLCWDGLPDYKDVGAAEQLSARVEEFLRAGGARPWQRALAVPALTEALTPAAG
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtcgccgaggaacccaccgcagcagagcccctgctcgcccccgccgagggggtt
ccacctgtgctggcgaccgccgacgaggtcgccgcggccgccaaatccctcgccgcgggc
accggcccactggccgtcgacgccgaacgcgcgtccggtttccgctactccgcccgcgcc
tatctgatccagctgcgccgcgagggcgccggctcgttcctcatcgatccgatcccggtc
accgaggcgctgaccccgctggccgaggcgatcaacgacctcgaatgggttctgcactcc
gccgatcaagatctgcccggcctcgccgagctcggtctgcgccccgcccgcctgttcgac
accgagctcggcggccgcatcgcgggctacgaacgcgtcggcctggccgcgatggtggag
aacctgctgggccgctccctgcgcaagggccacggcgccgccgattggtcgacccgcccg
ctgcccgacgaatggctcaactacgcggcactggatgtcgagttgctgctggaactgcgc
gacaccgtcgccggcgacctcaccacccagggcaagatggattgggccgccgaggaattc
gagcacatccgcaccatggacccgcccacccccaaggccgaccgttggcggcgcacctcc
ggcatccacaccctgcgccgtacccgccagctcgcgatcgtgcgcgaactgtggaccacc
cgcgacgaactcgcccgcgcccgcgacgtggcccccgctcgcatcctccccgattccgcc
atcgtggccgccgccaccggcgaaccccgcaccatcgcccagttgcgcaccctgcccgtc
ttcggcgggcctcggcaacgccggtactcccgcgattggctcgccgccgtcgaacgtgcc
cgcacgctccccgacaaagaactccccccgctgacgttgcctttcgacgggccacccccc
gtcaatcgttgggaacgccgcgaccccgccgccgcggcccgcctcgccaccgcgcgcagt
gccatgggcgagctctccaccgaacactcgatcccggtggagaacctgctctcccccgac
ctggttcggcggctgtgctgggacgggctgccggactacaaggacgtcggcgcggccgag
cagttgtcggctcgtgtcgaggagttccttcgtgcgggtggggcgcggccgtggcagcgg
gctcttgcggtgcccgcgctgaccgaggcgttgacgcccgctgccggatag
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