KEGG   Nocardia mangyaensis: BOX37_20940
Entry
BOX37_20940       CDS       T04582                                 
Name
(GenBank) ribonuclease J
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
nsl  Nocardia mangyaensis
Pathway
nsl03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:nsl00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    BOX37_20940
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:nsl03019]
    BOX37_20940
Messenger RNA biogenesis [BR:nsl03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     BOX37_20940
SSDB
Motif
Pfam: RNase_J_b_CASP RNase_J_C Lactamase_B_2 RMMBL Lactamase_B Anti-Pycsar_Apyc1 DUF459
Other DBs
NCBI-ProteinID: APE35989
UniProt: A0A1J0VVE6
LinkDB
Position
complement(4659303..4661402)
AA seq 699 aa
MTEPVARKPRRRAASRAAGAPEPTPVEAPVEKVEAPVEKKAPVADKVVPPKAAEPVVAEP
VAEIAAEAALTVEVEAATEAQTVAQERTEPKKASARRAKTKPAEQAAAPQQNRRGGGAGG
RGRQGGRGRGDVQSEPRQKAAQDKLGAPPKLPKNGLRVFALGGIGEIGRNMTVFEYDGKL
LIVDCGVLFPEDQQPGVDLILPDFRPIEDRMDDIVAIVLTHGHEDHIGAVPFLLRMRSDI
PVIGSKFTLALVAAKAREHRQQPKLREVAEGETTVHGPFELEYFAVNHSIPDALAIAIRT
PAGVVLHTGDIKLDQLPLDGRLTDLAGFSRLGDEGVDLLLIDSTNAEVPGFVTPEREIGG
VLDTVIGKARNRVIVASFASHVHRIQQVVDVAQKYNRKVCFVGRSMVRNMQIAQDLGYLT
VPENVVVEMDQAASLPGNRLVLISTGSQGEPLSALSRMARGEHRQIHIREDDLVVLASSL
IPGNENSVFAVVNGLARLGATVITQQSAKVHVSGHASAGELLYLYNAVRPTNAMPVHGEW
RHLRANAALAVATGVPEERVMLAEDGVVVDLVDGIASIVGRVPVGYVYVDGLSVGDVGES
TLSDRLVLGEGGFISIAIVIDSTTGKAVSTPEINGRGFSDDRTALHGANELVEAELLRLA
GEGITDTHRIAQGVRRVVGRWVADTYRRRPMIVPTVIGV
NT seq 2100 nt   +upstreamnt  +downstreamnt
atgaccgaacccgtcgctcgcaagccccgtcgtcgcgcggcctcccgtgccgcgggtgcg
cccgaacccacgccggtcgaggccccggtggagaaggtcgaggccccggtggagaagaag
gccccggtggcggacaaggtcgtgccgccgaaggccgccgaacccgtcgtcgccgaaccg
gtcgccgagatcgccgccgaggcggcgctgactgtcgaggtcgaggcggccaccgaagcg
cagaccgtcgcgcaggagcgcaccgagcccaagaaggccagtgcgcgtcgcgccaagacc
aagcccgccgagcaggcggccgcaccgcagcagaaccgtcgtggcggcggcgccggcggc
cgtggcaggcagggcggtcgtggtcgtggcgacgtgcagtccgaaccgcgccagaaggcc
gcccaggacaagctcggtgccccgccgaagctgcccaagaacggtctgcgcgtgttcgcc
ctcggcggtatcggcgaaatcggccgcaacatgaccgttttcgagtacgacggcaagctg
ctgatcgtcgactgcggtgtgctgttccccgaggaccagcagcccggcgtcgacctgatc
ctgcccgacttccggccgatcgaagaccggatggacgacatcgtcgccatcgtgctcacc
cacggtcacgaggaccacatcggcgcggtgccgttcctgctgcgtatgcgctccgacatc
ccggtgatcggttcgaagttcaccctcgccctggtcgcggccaaggcccgcgaacatcgg
cagcagcccaagctgcgtgaggtcgccgagggcgagaccacggtgcacgggccgttcgag
ctcgagtacttcgcggtcaaccactcgattcccgacgccctcgccatcgccatccgcact
cccgcgggcgtcgtgctgcacaccggggacatcaagctcgaccagctgcccctcgacggg
cggctgaccgacctggccgggttctcccgtctcggcgacgagggtgtcgacctgctcctg
atcgactcgaccaatgccgaagtccccggcttcgtcaccccggaacgtgagatcgggggc
gtgctcgacactgtgatcggcaaggcgcgcaaccgcgtcatcgtcgcgtccttcgccagc
catgtgcaccgcatccagcaggtcgtcgacgtggcgcagaagtacaaccgcaaggtgtgc
ttcgtcggccgctcgatggttcgcaacatgcagatcgcccaggacctgggctatctgacc
gtgcccgagaacgtggtcgtggagatggatcaggccgcgagcctgcccggcaatcgcctg
gtgctgatctccaccggctcgcagggtgaaccgctctcggcgctgtcgcggatggcgcgt
ggcgagcaccggcagatccacatccgtgaggacgacctggtcgtgctcgcttcctcgctg
atccccggcaacgagaactcggtgttcgcggtggtcaacggcctggctcggctcggcgcg
acggtgatcacccagcagagcgcgaaagtgcacgtctccggccacgcctcggccggtgaa
ctgctgtacctgtacaacgcggtgcggccgaccaacgccatgccggtgcacggcgaatgg
cggcatctgcgcgccaacgccgccctcgccgtggccaccggcgttcccgaggaacgggtg
atgctcgccgaggacggcgtggtggtcgacctggtcgacggcatcgcctccatcgtcggc
cgtgttccggtcgggtacgtctacgtggacggcctctcggtcggtgacgtcggcgagtcg
acgctgtcggaccgcctcgtgctcggtgagggtggcttcatttccatcgccatcgtcatc
gactcgaccaccggcaaggcggtcagcacgcccgagatcaacgggcgcggcttctccgac
gaccggaccgccctgcacggcgcgaacgaactggtcgaggccgagctgctgcgcctggcc
ggtgagggcatcaccgacacccaccgcatcgcccagggcgtgcgccgggtggtcgggcgc
tgggtcgccgacacctaccgtcgtcgcccgatgatcgtgcccacggtgatcggcgtctag

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