Nocardia mangyaensis: BOX37_20940
Help
Entry
BOX37_20940 CDS
T04582
Name
(GenBank) ribonuclease J
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
nsl
Nocardia mangyaensis
Pathway
nsl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nsl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BOX37_20940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nsl03019
]
BOX37_20940
Messenger RNA biogenesis [BR:
nsl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
BOX37_20940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B_2
RMMBL
Lactamase_B
Anti-Pycsar_Apyc1
DUF459
Motif
Other DBs
NCBI-ProteinID:
APE35989
UniProt:
A0A1J0VVE6
LinkDB
All DBs
Position
complement(4659303..4661402)
Genome browser
AA seq
699 aa
AA seq
DB search
MTEPVARKPRRRAASRAAGAPEPTPVEAPVEKVEAPVEKKAPVADKVVPPKAAEPVVAEP
VAEIAAEAALTVEVEAATEAQTVAQERTEPKKASARRAKTKPAEQAAAPQQNRRGGGAGG
RGRQGGRGRGDVQSEPRQKAAQDKLGAPPKLPKNGLRVFALGGIGEIGRNMTVFEYDGKL
LIVDCGVLFPEDQQPGVDLILPDFRPIEDRMDDIVAIVLTHGHEDHIGAVPFLLRMRSDI
PVIGSKFTLALVAAKAREHRQQPKLREVAEGETTVHGPFELEYFAVNHSIPDALAIAIRT
PAGVVLHTGDIKLDQLPLDGRLTDLAGFSRLGDEGVDLLLIDSTNAEVPGFVTPEREIGG
VLDTVIGKARNRVIVASFASHVHRIQQVVDVAQKYNRKVCFVGRSMVRNMQIAQDLGYLT
VPENVVVEMDQAASLPGNRLVLISTGSQGEPLSALSRMARGEHRQIHIREDDLVVLASSL
IPGNENSVFAVVNGLARLGATVITQQSAKVHVSGHASAGELLYLYNAVRPTNAMPVHGEW
RHLRANAALAVATGVPEERVMLAEDGVVVDLVDGIASIVGRVPVGYVYVDGLSVGDVGES
TLSDRLVLGEGGFISIAIVIDSTTGKAVSTPEINGRGFSDDRTALHGANELVEAELLRLA
GEGITDTHRIAQGVRRVVGRWVADTYRRRPMIVPTVIGV
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaacccgtcgctcgcaagccccgtcgtcgcgcggcctcccgtgccgcgggtgcg
cccgaacccacgccggtcgaggccccggtggagaaggtcgaggccccggtggagaagaag
gccccggtggcggacaaggtcgtgccgccgaaggccgccgaacccgtcgtcgccgaaccg
gtcgccgagatcgccgccgaggcggcgctgactgtcgaggtcgaggcggccaccgaagcg
cagaccgtcgcgcaggagcgcaccgagcccaagaaggccagtgcgcgtcgcgccaagacc
aagcccgccgagcaggcggccgcaccgcagcagaaccgtcgtggcggcggcgccggcggc
cgtggcaggcagggcggtcgtggtcgtggcgacgtgcagtccgaaccgcgccagaaggcc
gcccaggacaagctcggtgccccgccgaagctgcccaagaacggtctgcgcgtgttcgcc
ctcggcggtatcggcgaaatcggccgcaacatgaccgttttcgagtacgacggcaagctg
ctgatcgtcgactgcggtgtgctgttccccgaggaccagcagcccggcgtcgacctgatc
ctgcccgacttccggccgatcgaagaccggatggacgacatcgtcgccatcgtgctcacc
cacggtcacgaggaccacatcggcgcggtgccgttcctgctgcgtatgcgctccgacatc
ccggtgatcggttcgaagttcaccctcgccctggtcgcggccaaggcccgcgaacatcgg
cagcagcccaagctgcgtgaggtcgccgagggcgagaccacggtgcacgggccgttcgag
ctcgagtacttcgcggtcaaccactcgattcccgacgccctcgccatcgccatccgcact
cccgcgggcgtcgtgctgcacaccggggacatcaagctcgaccagctgcccctcgacggg
cggctgaccgacctggccgggttctcccgtctcggcgacgagggtgtcgacctgctcctg
atcgactcgaccaatgccgaagtccccggcttcgtcaccccggaacgtgagatcgggggc
gtgctcgacactgtgatcggcaaggcgcgcaaccgcgtcatcgtcgcgtccttcgccagc
catgtgcaccgcatccagcaggtcgtcgacgtggcgcagaagtacaaccgcaaggtgtgc
ttcgtcggccgctcgatggttcgcaacatgcagatcgcccaggacctgggctatctgacc
gtgcccgagaacgtggtcgtggagatggatcaggccgcgagcctgcccggcaatcgcctg
gtgctgatctccaccggctcgcagggtgaaccgctctcggcgctgtcgcggatggcgcgt
ggcgagcaccggcagatccacatccgtgaggacgacctggtcgtgctcgcttcctcgctg
atccccggcaacgagaactcggtgttcgcggtggtcaacggcctggctcggctcggcgcg
acggtgatcacccagcagagcgcgaaagtgcacgtctccggccacgcctcggccggtgaa
ctgctgtacctgtacaacgcggtgcggccgaccaacgccatgccggtgcacggcgaatgg
cggcatctgcgcgccaacgccgccctcgccgtggccaccggcgttcccgaggaacgggtg
atgctcgccgaggacggcgtggtggtcgacctggtcgacggcatcgcctccatcgtcggc
cgtgttccggtcgggtacgtctacgtggacggcctctcggtcggtgacgtcggcgagtcg
acgctgtcggaccgcctcgtgctcggtgagggtggcttcatttccatcgccatcgtcatc
gactcgaccaccggcaaggcggtcagcacgcccgagatcaacgggcgcggcttctccgac
gaccggaccgccctgcacggcgcgaacgaactggtcgaggccgagctgctgcgcctggcc
ggtgagggcatcaccgacacccaccgcatcgcccagggcgtgcgccgggtggtcgggcgc
tgggtcgccgacacctaccgtcgtcgcccgatgatcgtgcccacggtgatcggcgtctag
DBGET
integrated database retrieval system