Nocardia mangyaensis: BOX37_29245
Help
Entry
BOX37_29245 CDS
T04582
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
nsl
Nocardia mangyaensis
Pathway
nsl03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
nsl00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BOX37_29245
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nsl03021
]
BOX37_29245
03400 DNA repair and recombination proteins [BR:
nsl03400
]
BOX37_29245
Enzymes [BR:
nsl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BOX37_29245
Transcription machinery [BR:
nsl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BOX37_29245
DNA repair and recombination proteins [BR:
nsl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BOX37_29245
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
APE37345
UniProt:
A0A1J0VZD3
LinkDB
All DBs
Position
complement(6583696..6587649)
Genome browser
AA seq
1317 aa
AA seq
DB search
MLDVNFFDELRIGLATAEDIRQWSFGEVKKPETINYRTLKPEKDGLFCEKIFGPTRDWEC
YCGKYKRVRFKGIICERCGVEVTRAKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLEKIIYFAAYVIVGVDEELRHNELSTLEAEMEVEKKAVADQRDADLEARAQKLEAD
LAELEAEGAKSDVRRKVKDGGEREMRQLRDRAQRELDRLDEIWSTFTKLAVKQLIVDEVL
YRELVDRYGEYFTGAMGAESIQKLMENFDIDAEAENLRETIRSGKGQKKLRALKRLKVVA
AFQANGNSPMGMVLDAVPVIPPELRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLIDL
GAPEIIVNNEKRMLQESVDALFDNGRRGRPVTGPGNRPLKSLSDLLKGKQGRFRQNLLGK
RVDYSGRSVIVVGPQLKLHQCGLPKLMALELFKPFVMKRLVDLNHAQNIKSAKRMVERQR
PQVWDVLEEVIAEHPVLLNRAPTLHRLGIQAFEPQLVEGKAIQLHPLVCEAFNADFDGDQ
MAVHLPLSAEAQAEARILMLSSNNILSPASGRPLAMPRLDMVTGLFYLTRLDENGVGTYK
AARKDEAEFGVYSSPAEAQMAVDRGELTVRSMIKVRLTEQRPPREIEAELFPDGWNRGEA
WLAETTLGRVIFNDLLPADYAFINEPMPKKRQATIINDLAERYPMIVVAQTVDKLKDAGF
YWATRSGVTVSMSDVLVPPEKADIMERYESMADQIEKKYQRGALDHQERNNALVKIWQEA
TEEVGAALRTHYPPDNPIITIVDSGATGNFTQTRTLAGMKGLVTNPKGEFIPRPIKSSFR
EGLTVLEYFINTHGARKGLADTALRTADSGYLTRRLVDVSQDVIVREHDCGTERGIVVPI
AEKQADGSLIRDAHVETSTYARTLATDAVDAKGNVVVAKGADLGDPALEALLDAGITEVK
VRSVLTCTTGTGVCATCYGRSMATGKLVDIGEAVGIVAAQSIGEPGTQLTMRTFHQGGVA
GDDITGGLPRVQELFEARVPKGKAPIAEVSGRVRLEDDDRFYKITIIPDDGSEEVVYDKL
SKRQRLRVFKHDDGSERLLADGDHVEVGQQLLEGAADPHEVLRVMGPRQVQVHLVHEVQE
VYRSQGVSIHDKHIEVIVRQMLRRVTIIDSGATEFLPGSLTERSEFEASNRRVVAEGNEP
ASGRPVLMGITKASLATDSWLSAASFQETTRVLTDAAINCRSDKLIGLKENVIIGKLIPA
GTGINRYRNIQVQPTEEARAAAYAVPSYDDTYYSPDSFGSSTGAAVPLDDYGFSDYR
NT seq
3954 nt
NT seq
+upstream
nt +downstream
nt
gtgctagacgtcaacttcttcgatgaactccggatcggcctggccaccgccgaagacatt
cggcagtggtccttcggcgaggtcaagaagccggagaccatcaactaccgcacgctcaag
ccggagaaggacgggctcttctgcgagaagatcttcggccccacccgggactgggagtgc
tactgcggcaagtacaagcgtgtccggttcaagggcatcatctgtgagcgctgcggcgtc
gaggtgactcgcgccaaggtgcgtcgtgagcggatgggccacatcgagctggccgccccg
gtcacccacatctggtacttcaagggcgttccctcgcgcttgggctacctgctggatctg
gcgccgaaggatctcgagaagatcatctacttcgccgcctacgtcatcgtcggtgtcgac
gaggagctgcgccacaacgagctcagcaccctcgaggccgagatggaggtcgagaagaag
gccgtcgccgatcagcgcgacgccgatctcgaggcccgcgcgcagaagctcgaggccgat
ctggcggagctggaggccgagggcgccaagtccgatgtccgtcgcaaggtcaaggacggc
ggcgagcgcgagatgcgtcagctgcgcgaccgcgcccagcgtgagctggaccgcctcgac
gagatctggtccaccttcaccaagctggcggtcaagcagctcatcgtcgacgaggtgctc
taccgcgagctcgtcgaccgctatggcgagtacttcaccggcgccatgggtgcggagtcc
atccagaagctgatggagaacttcgacatcgacgccgaggccgagaacctgcgcgagacc
attcgctcgggcaagggccagaagaagctgcgcgcgctcaagcggctcaaggtcgtcgcg
gccttccaggccaacggcaactcgcccatgggcatggtgctcgacgccgttccggtgatc
ccgccggagctgcgcccgatggtccagctcgacggtggccgtttcgccacctccgacctg
aacgacctgtaccgccgcgtgatcaaccgcaacaaccgcctcaagcgactgatcgatctg
ggtgcgcccgagatcatcgtcaacaacgagaagcggatgctgcaggagtccgtggacgcg
ctgttcgacaacggtcgtcgtggccgtccggtgaccggaccgggcaaccgcccgctgaag
tcgctgagcgatctgctcaagggcaagcagggccggttccgtcagaacctgctcggcaag
cgcgtggactactcgggccgttcggtcatcgtggtcggtccgcagctcaagctgcaccag
tgcggtctgccgaagctgatggcgctcgagctgttcaagccgttcgtcatgaagcgtctg
gtggatctcaaccacgcgcagaacatcaagtccgccaagcggatggtggagcgtcagcgt
ccccaggtgtgggatgtcctcgaagaggtcatcgccgagcacccggtgctgctcaaccgc
gcgcccaccctgcaccgcctcggtatccaggccttcgagccgcagctggtcgaaggcaag
gccatccagctgcacccgctggtgtgtgaggcgttcaacgccgacttcgacggtgaccag
atggctgtgcacctgccgctgtcggcggaggcgcaggccgaggcgcgcatcctgatgctg
tcgtcgaacaacatcctgtccccggcctcgggtcgcccgctggcgatgccgcgactggac
atggtgaccggcctgttctacctgactcgtctcgacgagaacggtgtcggcacctacaag
gccgcgcgcaaggacgaggccgagttcggcgtctactcctcgccggccgaggcgcagatg
gccgtcgaccgcggtgagctcaccgtgcgctcgatgatcaaggtgcggctcaccgagcag
cgtccgccgcgtgagatcgaggcggaactgttcccggacggctggaaccgcggtgaggcg
tggctggccgagaccaccctgggccgggtgatcttcaacgatctgctcccggcggactac
gcgttcatcaacgagccgatgccgaagaagcgtcaggccacgatcatcaacgacctcgct
gagcgttacccgatgatcgttgtcgcgcagaccgtcgacaagctcaaggacgccggcttc
tactgggccacgcgttcgggtgtcaccgtctccatgtcggacgtgctcgttccgccggag
aaggccgacatcatggagcgctacgagtccatggccgatcagatcgagaagaagtaccag
cgtggtgcgctcgatcaccaggagcgcaacaacgccctggtcaagatctggcaggaagcg
accgaagaggtgggcgccgcgctgcggacccactacccgccggacaacccgatcatcacg
atcgtcgactccggcgcgacgggtaacttcacccagacccgtacgctggccggcatgaag
ggcctggtgacgaacccgaagggtgagttcatcccgcgcccgatcaagtcctcgttccgt
gagggcctgaccgtgctcgagtacttcatcaacacccacggtgctcgtaagggtctggcc
gacaccgcgctgcgtaccgccgactcgggttacctgacccgtcgtctggtggacgtctcg
caggacgtcatcgtgcgtgagcacgactgtggcaccgagcgcggcatcgtcgtgccgatc
gcggagaagcaggccgacggctcgctcatccgggacgcgcacgtcgagacctcgacctac
gcgcgcaccctggcgaccgacgcggtcgacgccaagggcaacgtcgtggtggccaagggc
gccgatctcggcgacccggccctggaggcgctgctcgacgccgggatcaccgaggtgaag
gtccgctccgtgctgacctgcaccaccggtaccggcgtctgcgccacctgctacggccgc
tcgatggccaccggcaagctggtcgacatcggcgaggccgtcggcatcgtcgccgcccag
tccatcggtgagcccggtacccagctgaccatgcgtaccttccaccagggtggcgtcgcc
ggcgacgacatcaccggtggtctgccgcgtgtccaggagctcttcgaggctcgtgtcccc
aagggcaaggcgccgatcgcggaggtctcgggccgggtgcgcctcgaggacgacgaccgc
ttctacaagatcacgatcatccctgatgacgggtccgaggaagtcgtctacgacaagctc
tcgaagcgtcagcgtctgcgtgtgttcaagcacgacgacggctccgagcgtctgctggcc
gacggtgaccacgtggaggtgggtcagcagctgctcgagggcgctgccgatccgcacgag
gtgctgcgcgtgatgggtccccgtcaggtgcaggtccacctggtccacgaggtccaggag
gtctatcgctcgcagggtgtgtcgatccacgacaagcacatcgaggtcattgtgcgccag
atgctgcgtcgcgtgacgatcatcgattccggtgccacggagttcctgcccggctcgctc
accgagcgttccgagttcgaggcctccaaccgtcgcgtcgtcgccgaaggcaacgagccc
gcgtcgggtcgcccggtgctgatgggtatcaccaaggcgtcgctggccaccgattcgtgg
ctgtcggcggcctccttccaggagaccacccgagtgctgacggacgcggcgatcaactgc
cgctccgacaagctgatcggcctgaaggagaacgtgatcatcggcaagctgatcccggcc
ggtaccggtatcaaccgttaccgcaacatccaggttcagcccaccgaggaagcccgtgcc
gcggcgtacgcggtgccgtcttacgacgacacctactactccccggacagcttcggctcc
tcgaccggtgccgcggtcccgctggacgactacggtttcagcgactaccgctag
DBGET
integrated database retrieval system
