Neotabrizicola shimadae: JO391_00905
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Entry
JO391_00905 CDS
T08148
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
nsm
Neotabrizicola shimadae
Pathway
nsm03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
nsm00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
JO391_00905
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nsm03021
]
JO391_00905
03400 DNA repair and recombination proteins [BR:
nsm03400
]
JO391_00905
Enzymes [BR:
nsm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
JO391_00905
Transcription machinery [BR:
nsm03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
JO391_00905
DNA repair and recombination proteins [BR:
nsm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
JO391_00905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
DUF4249
Motif
Other DBs
NCBI-ProteinID:
QYZ70127
UniProt:
A0A8G0ZU52
LinkDB
All DBs
Position
complement(185110..186126)
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AA seq
338 aa
AA seq
DB search
MIHKNWQELIKPAQLVVKPGADPSRTATVIAEPLERGFGLTLGNALRRVLLSSLQGAAIT
SIQIDNVLHEFSSVAGVREDVTDIVLNLKGVRLKMEVEGPKRLSISAKGPGVVTAGDISE
TNGIEILNRDHVICHLDDGADVFMELTVNTGKGYVSADKNRPEDAPIGLIPIDAIYSPVK
KVSYEVQPTREGQVLDYDKLTMKIETDGSLTPDDAVAYAARILQDQLAIFVNFDEPESAS
KQELDAGLEFNPLLLKKVDELELSVRSANCLKNDNIVYIGDLIQKTEAEMLRTPNFGRKS
LNEIKEVLSGMGLHLGMEVEDWPPENIEDLAKRFEDQF
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgatccacaagaactggcaggaacttatcaagccggcccagctggtcgtgaagcccggc
gctgacccgtcgcgtaccgcgaccgtcatcgccgaaccgctggagcggggcttcggcctg
acgctcggcaacgcgctgcgccgggtgctcttgtcctcgctgcaaggcgcggccatcacc
tcgattcagatcgacaatgtcctgcacgagttctcctcggtggctggtgtccgcgaggac
gtgaccgacatcgttctgaacctgaagggcgtgcgtctgaagatggaagtcgaggggccg
aaacgcctgtcgatttcggccaaggggccgggcgtcgttacagccggcgacatctcggaa
accaacggcatcgagatcctgaaccgcgaccacgtcatctgtcacctggatgacggcgcc
gacgtgttcatggaactgacggtcaacaccggcaagggctatgtttcggcagacaagaac
cgccctgaagatgcgccgatcggcctgatcccgatcgacgcgatctactcgccggtcaag
aaggtcagctacgaagtgcagcccacccgtgagggtcaggtgcttgactacgacaagctg
accatgaagatcgagactgacgggtcgctgacccccgatgatgccgtggcctatgcggca
cgcatcctccaggaccagctggcgatcttcgtcaacttcgacgaacccgaatcggcttcc
aagcaggagcttgatgcgggtctggagttcaacccgctcctcctgaagaaggtggacgag
cttgagctttcggtccgttcggcgaactgcctgaagaacgacaacatcgtctacatcggc
gaccttatccagaagaccgaggcggaaatgctccgcaccccgaacttcggccgcaagtcg
ctgaacgagatcaaggaagtgctctcgggcatgggcctgcacctcggcatggaagtcgag
gactggccgccggagaacatcgaggatctcgcaaagcggttcgaggaccagttctga
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