Neotabrizicola shimadae: JO391_02280
Help
Entry
JO391_02280 CDS
T08148
Name
(GenBank) autotransporter outer membrane beta-barrel domain-containing protein
Organism
nsm
Neotabrizicola shimadae
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
QYZ70379
UniProt:
A0A8G1EEB9
LinkDB
All DBs
Position
complement(473493..480884)
Genome browser
AA seq
2463 aa
AA seq
DB search
MKRSLLGTSLVAICPAPALADGCVTSGNTVTCTGDPSLPIVVENIPYLTIQSLSGSLTPP
SGTLAVSATVTSDIGNDAGSVSVTFDDAGAGWSTTNAPGLQINSAGGTGVDAGLGPDQAS
GGPGGSGGATGFNITAGTIAASGTNATAVSLYAAGGQGGSANMQPVTPDNDNVTGGSAGQ
GGGFGNMDPAATVYVTASSMSLADNAAGIVATVIGGDGGQLDQNNETIGQNNVTGSAGGA
GGDGGQIAGWLQLSEVRLSQAGTGAVVLTSQGGSGSDGGAAVSSVGLGQEKGTGGAGGAG
GAGDFVGLLGSISVSGSAASGFTAVLAQSIGGNGGSGGLVSGGSGSSGGAGGAGGAGGAV
TVGSNEAFGDFAVTAALSGNGVRGFMARSYGGVGGDGGATQNSFGTKGQGGAAAGGGDAS
EITAWVTATIATSGSSSDAMVFQSVGGFAGSGSAESYGAGEQSHGDGGGIGAEVTLVAAE
NGIGISTNGNSSDGVTAQSVGGGGGKAFQSLGLSGLGGANLAGGSGGAVELTVSGAGIAT
FGSFSRAIFASSVGGGGGSGGPNTGISTIGAAGGTGGNGQSVTVYGLSDITTSGGQSDGI
LASSIGGGGGSASSAVGLFSIGGKTGGGGGDGGAVAVTYGGAITTGGGDADGIHALSVGG
GGGDGANAVAAGVIYENAVGGTGGKGGTGSTVSVVQLAGASDLIRTTGDRSRGILAQSIG
GGGGSGGSAATGGILTGFSHTVGGTAGTGGSADDVTVSIAGGISTMGAHSDGILAQSIGG
GGGNASSVVTAGMPGGISVSATIGGWGGNGGSAGGVSVAAGGGIATGGAHASAIAALATG
GGGGHSGTLVSATGVDLAAVNVSIGGRGGKGGNVNGPVTVTANGNLSTAGDHSAGIIAHS
TGGGGGHGSNIVNATTLTLGSIGASVGAAGGNAGNASAVSVTAQGAISTKGVMSSGISAV
SAGGGGGSAGSIVNSNVASVGDVDVTIGASGGGGGSGGAVTVSTAGDIQTVGHQSDGIYA
ASTGGKGGSAGTHIAADATANVGTVGSITIAVGGQGGAGGTAGNVAVTTANSITTAGDLS
AGLIAQSIGGDGGRALGTVAANLGDIGNATVLIGGAGGNGGIAGTVDVVTKDSGAAITTS
GIVSHGIVAQSMGGGGGAGGFAGEASINVGDEASGGISGQLGITVGGGGAPGGRSAKVTV
QNSAAITTSNLMSFGILAQSVGGNGGDGGSAYAFNVDVNSPDAVNVNVDVGADGGFGAEG
SEVDLTNTGAVTTESFMSVGLFAQSVGGNGGNGGSSYTALAQVVASSKFEVDANIGGGGG
GGGAGAAVVLNNQGTVITKASGSDAIYAQSVGGGGGRGGNAGYLALNLSSPFSSDNPETQ
ITVGVKVGGGGDGGEGANSSTVQVTNTGNVTTTGTRSRAIFAQSVGGGGGDGGTSSATSF
AVSDICNNPSVSEYVCDSKLDPNKEQAANIGINMTVELGGNGAAGGDGDTVAVNNSGALS
TAGQLSHGIYAQSVGGGGGNGGEGALGIEAWTTNTLANTIADLPGNLLPSFTSVDIAVGG
TGAGGGNGGAVTITNSGAITIAGPDASYVTKYTGFSGGARGALSFLAGGTGIFAQSVGGG
GGDGGAGSSSFTAVVTVGNSGGGGGQGGAVTVNNTATITNTSGFSGTGIFAQSVGGGGGT
AGDVGQAFSDPHESLNIGAGVAVSKTPGQGGDGGEVNVASGGAILTTGTSSPGIIAQSVG
GSGGIAAVASDARTTIYVGSGVAAGNGGNVTVTNAAPIEVQGQGSVGIVALSAGGANSSD
QSGTVTVNANANITASGSGGRAILVSSDSYKNQATGTVNININQGVTLQTGANGAETVLV
LNGSETSTLTNAGTIIGGNAASNAIYVKSDNSFQIQNYGTITGSISGEAGSVGGTYGFLS
LDNNVGATLNTGSLINLPGAAGSFVSSGTISPGAQGTIADTTIQAGQMILLGSGSTYQPD
LDASDEVGSGIVASDMLSLVPGTFAPGDGILQIEAAIVAPSMLISQPGKALRSGTAYVMD
SDYNFAASDFTVQDTATVDYSLSTSSTVTSGTTTLVLDYSISTTPWNLPGAPAQLLSRVN
SNHRSFGDYLDRLFFTPIEGVDDAFISSLAEDVLAIPDMASLLESYEDYIADEALAVPDA
TLLGSLAFSKDLHGCGATGLAGASKLEQDTYCTWGRFYGRGLDYDPSAAGPTYTEQVLGL
SLGIQTEFNGDMTLGGALDYESGDLTLGNGTGSVSRFMAGAMLKSDLGFMTLAGSLEGGN
YSSTISRSFTVGGDDFTATGAPDGTWLAAHVRANSRFNQGGGFIDPTLDIGLTSLRQDSF
VEQGADGFNMSVSELEQTTVSINPFVTFGTSFLQDGMTGQFSLRAGVLGLVGQDPSVDAS
FVGVGTSGPTFVIRNSQTNLFGDLGAAVDLSISDSLALRASADALVSDDQTSYSAQVLLN
YSF
NT seq
7392 nt
NT seq
+upstream
nt +downstream
nt
gtgaagcgctctctccttggcaccagcctggtggcgatctgtccagcgccggccctggca
gacggatgcgtgacctctggcaataccgtgacctgcaccggcgacccttcgcttcctatc
gtggtcgaaaacatcccctatctgacgatccagtctctttccggcagcctgacgccaccg
tcgggcaccctggccgtcagtgccactgtgacctcggacatcggcaacgatgccggctcg
gtttcggtcacgtttgatgacgccggcgccggatggtcgacgacgaatgcgcccggcctt
cagatcaacagcgccgggggtacaggcgtagatgccggattggggcctgaccaggcctcg
ggcggccctggcggctctggtggcgcaaccggtttcaacatcacggccgggacgatcgcc
gcatcgggaacaaacgccacagcggtttctctgtacgctgccggtgggcagggcgggtca
gccaacatgcagccggttaccccggacaacgacaatgtaaccggcggatcggccggccag
ggcggcggcttcggcaacatggacccggcggccacggtctacgtcaccgcgtccagcatg
agccttgcggacaacgcggcaggcatcgttgcgaccgtgatcgggggcgacggcgggcag
ctggatcagaacaacgagacgatcggtcagaacaacgtcaccggcagtgccggcggcgcc
gggggcgatggcgggcagattgccggctggctgcaattgagcgaggtcaggctgagccag
gcgggaaccggggccgtcgtgctgacctcgcaggggggcagcggcagcgacggcggagcc
gccgtttcgtcggtcgggcttggccaggagaagggcaccgggggcgcaggcggggccggc
ggagcgggcgatttcgtcggcctgctgggcagcatttcggtttcgggctcggcagcctcg
gggttcacggcggtgcttgcgcagtcgatcggcggcaacggcggtagcggcggcctggtg
tctggtggcagcggctcgtcgggcggcgcaggcggtgcgggaggtgcgggcggcgcggtg
acggtcggaagcaacgaagccttcggcgacttcgcagtgaccgccgcactctccggaaac
ggggtgcgcggcttcatggcgcgcagctacggcggggtgggcggcgatgggggtgcgacc
cagaacagctttggcaccaagggtcagggtggcgcggcagcgggcggcggtgacgcttcc
gagatcacggcatgggttacggcaaccatcgcgacctccggaagttcctcggatgccatg
gtgttccaatcggtcggcggcttcgccggaagcggatcggccgaatcctacggagccggg
gaacaaagccatggcgatggcggtggcatcggcgccgaggtcacgcttgtcgcggcagag
aacggcatcggcatatccacgaacgggaactcgtcggacggcgtaaccgcccagtcggtc
ggcggtggcggcggcaaggcgtttcagagccttgggctgagcggattgggcggcgcgaac
cttgccggcggcagtggcggggcggtggaactgacggtcagcggcgccggaattgccacc
tttggcagcttttcgcgcgcgatctttgccagcagcgtgggcggcggcggtggcagcggc
gggcccaacaccggcatctcgacgatcggcgcggccgggggcaccggaggcaacggccag
tcggtcacggtctatggtctgtctgacatcaccacttcgggcggacagtcggacggtatc
cttgcaagcagcatcggcggcggtggcgggtcagcatcctctgccgtggggctcttctcc
atcggggggaagaccggcggtggtggcggggacggcggtgccgttgcggtgacctatgga
ggggccatcacgaccggcggcggcgatgccgatggcatccatgccttgtcggtcggcggc
gggggcggtgatggcgccaacgcagtcgccgcaggagtgatctacgagaatgcggtgggg
ggcacgggcggaaagggcggcaccggcagcacagtcagcgttgtgcagctagccggcgca
agcgacctgatccgcacgacgggcgaccggtcgcgcgggatcctcgctcaatccattggt
ggcggcggcgggtcaggtggcagcgcggccacgggcggaattctgaccggcttcagccac
acagtcggtggcacagccggcacgggcggcagtgcggacgacgtcaccgtaagcattgcg
ggcggcatctcgacgatgggcgcccattcggacggcatcctcgcccagtccatcggcggc
gggggcgggaacgcttcgagcgtggtgacggccggtatgccgggcggcatcagcgtgtcg
gcgaccatcggcggttggggcggcaatggcggcagcgcaggcggggtcagcgttgccgca
ggcgggggcatagcaacgggcggcgcccatgcctcagccatcgccgcactggccacgggc
ggcggtggaggacattcgggcacgctcgtctcggccaccggagtagacctcgccgcagtg
aatgtgagcatcggcgggcggggcgggaaaggcggcaatgtcaatggccccgtgaccgtg
acggcgaacggcaacctgtcgaccgcgggcgatcattccgcggggatcatcgcccattcc
accggtggcgggggcggccacggcagcaatatcgtcaacgcgaccaccctgaccttgggc
tcgatcggtgcgtcggtgggcgctgcgggcggcaatgccggcaatgcgagcgccgtcagc
gtcaccgcgcagggcgcgatctctaccaagggtgtgatgtcttccgggatttcggcggtc
agcgccggaggaggcggcggctcggccggatccatcgtgaattcgaatgtcgcttcggtc
ggcgatgtcgatgttaccattggcgcatcgggcggcggggggggcagcgggggcgcggtg
accgtttccactgccggcgacatccagacggtgggccaccagtccgacgggatctatgca
gcctcaaccggcggcaagggtggctcagcgggcacgcatatcgccgctgacgcaaccgca
aacgtgggaacggtgggcagcatcaccatcgcggttggcggtcaagggggcgccggagga
acggcgggcaatgtcgcggtcaccaccgccaacagcatcacgacggcgggcgatctgtca
gccggcctgatcgcgcagtcgatcggcggcgatggcgggcgggcgcttgggacggtggcg
gccaatcttggcgacatcggcaatgccacggtgctgatcggtggggcgggcggcaatggc
gggatcgccgggaccgtggacgtggtgacaaaggacagcggcgctgccatcacgaccagc
ggcatcgtctcgcacggcattgtggcacaaagcatgggcggaggcggtggcgcgggggga
tttgccggcgaagcctcgatcaatgtcggggatgaggcgagcggcggcatttcgggccag
ttgggtattactgtcggcggcggcggagcgccgggcgggcggtcggcgaaggtcacggtc
cagaacagcgcggcgatcaccacgtccaacctgatgagcttcggcattcttgcgcaaagc
gtgggcggcaacggcggcgacggcggcagcgcctatgctttcaacgtcgatgtgaactcg
cctgacgcggtgaacgtgaatgtcgatgtcggcgctgatggcggtttcggcgccgaaggc
tctgaagtcgatttgaccaacaccggggcagtcaccaccgaaagtttcatgtcggtcggc
ctcttcgctcagtccgtgggcggcaacggcggcaacggtggatcaagctatacggcactg
gctcaggtcgtcgcctcgtcgaagttcgaggtcgatgccaatatcggcggcgggggtggc
ggcggcggtgctggcgctgccgtggtcctgaacaaccagggaacggtcatcaccaaggcg
agcgggtctgacgcgatctatgcgcaatcggtgggcggcggaggcgggcgcggcggcaat
gccggctaccttgcgctgaacctcagcagcccgttttcatccgacaatcccgaaacccag
atcacggtcggcgtgaaggtcggcggcggcggcgacgggggtgagggggcgaacagcagc
accgttcaggtgacgaacaccgggaatgtcacaacgacaggaacccggtcgcgggcgatc
tttgcgcagtcggtgggcggcggcggcggggacggcggcacgagttcggccacgtctttt
gccgtgagcgacatctgcaacaacccgtctgtgagcgagtacgtctgcgacagcaagctt
gacccgaacaaggaacaggccgccaatatcggcatcaacatgacggtcgaacttggcggc
aacggcgcggccggcggggacggcgacacagtcgccgtgaacaacagcggtgctctttca
acggccgggcagctcagccacgggatctatgcccagtctgtcggcggcggcggcggcaat
gggggcgaaggcgccctgggcattgaggcctggacgacaaacaccctggccaacacgatt
gccgacctgccgggcaatctgcttccctcgttcaccagcgtcgacatcgcggtgggtggc
accggtgcgggcggcggcaatggcggggctgtcacaataaccaacagcggcgccatcacc
atcgcgggacccgacgcgtcttacgtgaccaagtacaccggcttttcggggggggcacgt
ggcgccctcagcttccttgcaggaggcaccggtatatttgcgcaatcggtgggcggcggc
gggggagacggcggcgccggatcatccagctttacggccgttgtcacggttggcaattcg
ggcggtggcggcggtcagggtggcgcggtcacggtaaacaatacggcaaccatcaccaat
acctcgggcttcagcggcaccggaatcttcgcccaatcggtgggtggcggcggcggaacg
gccggcgacgttgggcaggccttctcggacccgcacgagtccctgaacatcggcgctggt
gtcgcggtttcaaagacgcccggccaaggcggtgacggcggcgaagtcaacgttgccagt
ggcggtgcgatcctgacaacgggaacatcttcccccgggatcatcgcccagtcggtgggc
gggtcgggtggcatcgccgctgtggcaagcgacgccaggacaacgatctatgtcggcagc
ggggtcgctgccggcaatggcggcaatgtgactgtgacgaatgccgccccgatcgaggtt
cagggccagggctcggtaggcatcgtggcgttgagcgccggtggcgccaattcctcggat
cagagcggcaccgtaacagtgaacgcgaacgcgaacatcaccgccagcgggtcaggcggc
cgcgccatactggtgtcgagcgacagctacaagaaccaggcgacgggcacggtcaacatc
aacatcaaccagggcgtgacccttcagaccggcgcaaacggggctgaaaccgtgctggtg
ctgaacggcagcgaaacctcgacgctgacgaatgccggcacgatcattggcggaaacgcg
gccagcaatgcgatctacgtcaagtccgacaacagcttccagatccagaactacggcacg
atcaccggctcgatctctggggaggcgggcagcgtgggcggaacgtacgggttcctttcg
ctggacaacaatgttggcgcgacgctgaacaccggcagcctgatcaacttgccaggagcc
gcgggatccttcgtttcgtctggcacgatatcgccgggcgcgcaggggaccattgccgac
accaccattcaggcgggtcagatgatcctgcttggctctgggtccacctatcagccggat
ctggatgcgagcgatgaggtcggaagcggtatcgttgcctctgacatgctttcactcgtg
ccaggcacctttgcacccggcgacggcatcttgcagatcgaggccgcgatcgtcgccccc
agcatgctgatttcgcaaccggggaaggccttgaggtcgggcacggcctacgtgatggac
agtgactacaacttcgcggcttccgacttcacggtgcaggataccgcgacggtcgactac
agcctgtcgacaagttccaccgtgaccagcggcaccaccacgcttgtgctggactattcc
atctccaccacgccctggaacctgccgggggcaccggcgcagcttctctcgcgcgtcaac
tccaaccaccgcagcttcggagactacctggaccggctgttctttacgcccatcgagggc
gtggacgatgccttcatctcgtcgcttgccgaagacgtgctggcgattcccgacatggcg
agccttcttgagagctatgaagactatatcgccgatgaagccttggccgttccggacgca
accttgctgggcagtctggccttctcgaaggatctgcacgggtgcggtgcgaccggcctg
gcgggcgcgtcaaagctggaacaggacacctactgcacctggggacgcttctatggccgc
gggctggactatgatcccagtgcagcaggtcccacctacaccgaacaggtactgggactg
tccctcggaattcagaccgagttcaacggcgacatgaccctgggcggggcactggattac
gaatcgggtgacctgacccttggcaacggcaccggctcggtttcccgcttcatggcaggt
gccatgctgaaatccgatctgggtttcatgacacttgccggttcgctggaaggcgggaac
tactcatccacgatcagccgcagcttcaccgtaggcggcgacgacttcaccgcaacgggc
gctccggacgggacatggctggccgcacatgtgcgggccaacagcaggttcaaccaggga
ggcgggttcatcgatcccacgctcgacatcggtctgacctcgcttcggcaggacagcttc
gtcgagcagggcgccgacggcttcaacatgtccgtttccgaactggagcagacgaccgtc
agcatcaaccccttcgtgaccttcgggaccagcttccttcaggacgggatgaccggccaa
ttctcgctgcgggcgggggttctgggccttgtcgggcaagatccgtccgtcgatgcctcc
ttcgtcggggtcggtacttcgggcccaacctttgtgatcaggaacagccagacgaacctg
ttcggcgatctgggggcggcagttgacctgtcgatatcggacagcctcgcccttcgcgcc
tcggctgatgcgctggtgtccgacgaccagacctcttactctgcgcaggtgctgctgaac
tattccttctga
DBGET
integrated database retrieval system
