Neotabrizicola shimadae: JO391_03740
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Entry
JO391_03740 CDS
T08148
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
nsm
Neotabrizicola shimadae
Pathway
nsm02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
nsm00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
JO391_03740
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nsm02000
]
JO391_03740
Transporters [BR:
nsm02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
JO391_03740
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
QYZ70641
UniProt:
A0A8G0ZXE6
LinkDB
All DBs
Position
complement(795020..796618)
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AA seq
532 aa
AA seq
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MTFEARLRRAGAVGLAALLLGTAPVALMAATPADTLVIADAIDDIVSLDPHEAYEFSGLD
VVNNTYDGLIELDPVSKELVPGLAESWSVADDGVTYSFKMKPGITFASGNPVTAADAAFS
LQRAVKINKTPAFILNQFGWSAENVDQMITADGDTLTFKVDKAYAPTFVYNILTAGVASI
VDQKTVMEHDANGDMGNEWLKSNSAGSGAYVLKSFKPNEGYVLEANPTHWRGPAKISKVF
MQHIPEAATQRLQLEKGDIDIARELTPTDIEGLAGNAAVKVQPDVGGQIFYLSFNQKNEM
YKNQKFLDAMRYAIDYQGMVDTFLKGTEVVHQSFLPIGYLGALEDNPYSLDIEKAKALVA
ESGVQNPKVVLDVRNASDRMDMAQSIQNTFGQAGITVELNVGEGAEQLKRYRARQHDATL
QSWGPDYPDPNTNSSTFAENPDNSDEAQNTGYLAWRNAYDPGELTAMSQAAVMEMDAGKR
KAMYEELQKKHRETSPFIVMFQIGYQTGMQANVENFYTGGAIDSAAYWLVTK
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atgactttcgaagcacgcctgcgccgcgcgggcgccgttggacttgccgcccttctgctg
ggtaccgcgccggtcgccctgatggcggcgacgccggccgacacgctggtcatcgccgat
gccatcgacgacatcgtctcgcttgacccgcacgaggcctatgagttttcggggctcgac
gtggtgaacaacacctatgacgggctgatcgagctggacccggtctcaaaggagctggtg
cccggcctggcggaaagctggtcggtggccgatgacggtgtgacctacagcttcaagatg
aagccgggcatcaccttcgcgtcgggcaaccctgtcaccgcggcggatgcggccttctcg
ctgcaacgcgccgtcaaaatcaacaagaccccggccttcattctgaaccagttcggctgg
tcggccgagaacgttgaccagatgatcaccgcagacggcgacacgctgaccttcaaggtc
gacaaggcctatgcgccaaccttcgtctacaacatcctgaccgctggcgtcgcctcgatc
gtcgaccagaagaccgtcatggagcatgacgcaaacggcgacatgggcaacgaatggctg
aagtcgaactcggccggttcgggcgcctatgtcctgaagtccttcaagccgaacgaaggc
tatgtgctggaggccaacccgacgcattggcgcgggccggcgaagatttcgaaggtcttc
atgcagcacattccggaagccgcgactcagcgcctgcagctggaaaagggcgacatcgac
atcgcgcgggaactgacccccaccgacatcgagggcctggccggcaacgcggcggtgaag
gtgcagccggatgtcggcgggcagatcttctacctctcgttcaaccagaagaacgagatg
tacaagaaccagaagttcctggatgcgatgcgctatgccatcgactaccagggcatggtg
gacaccttcctgaagggcaccgaggtggtgcaccagtccttcctgcccatcggctatttg
ggcgcgctggaggacaacccctactcgctggatatcgagaaggccaaggcgctggtggcg
gagtcgggcgtccagaacccgaaggtcgtgctggacgtacgcaacgcgtcggaccggatg
gacatggcgcagtcgatccagaacaccttcggtcaggccggcatcacggtggaactgaac
gtcggcgaaggggcagagcagctgaaacgctatcgcgcccgccagcacgatgccacgctg
caaagctggggcccggactatcccgaccccaacaccaactcttcgacctttgccgaaaac
cccgacaactcggacgaggcgcagaacacgggctaccttgcctggcgtaatgcctatgat
ccgggcgaactgacggcgatgagccaggcggccgtcatggaaatggacgccggcaagcgc
aaggcgatgtacgaggaactgcagaagaagcaccgcgagacctcgcccttcatcgtgatg
ttccagatcggctaccagaccgggatgcaggcgaacgtcgagaacttctacaccggcggc
gcgatcgactcggccgcctactggctggtcaccaagtga
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