Neotabrizicola shimadae: JO391_04065
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Entry
JO391_04065 CDS
T08148
Symbol
kdsA
Name
(GenBank) 3-deoxy-8-phosphooctulonate synthase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
nsm
Neotabrizicola shimadae
Pathway
nsm00541
Biosynthesis of various nucleotide sugars
nsm01100
Metabolic pathways
nsm01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
nsm00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
JO391_04065 (kdsA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
nsm01005
]
JO391_04065 (kdsA)
Enzymes [BR:
nsm01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
JO391_04065 (kdsA)
Lipopolysaccharide biosynthesis proteins [BR:
nsm01005
]
Lipid A
JO391_04065 (kdsA)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
Motif
Other DBs
NCBI-ProteinID:
QYZ70699
UniProt:
A0A8G0ZUH0
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All DBs
Position
864432..865262
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AA seq
276 aa
AA seq
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MTHVSIGGLTAGNDLPLLVIAGPCQLESLDHAQMIAGTLAEACAMAGAQYVFKASYDKAN
RTSLKGKRGLGMEKGLQVLQAVKAMGMPVLTDFHEPDQAAEVASVVDVLQIPALLCRQTD
LLLAAGRTGAVVNVKKGQFLDPYGMANVAQKIASTGNERILLTERGTTFGYNGLVADMRS
LPIMARTGYPVVMDATHAVAFPGGLGDSSGGQREFAPVLARAAVAIGIAGVFLETHEDPD
RAPSDGPNMIHLADMPRLIESLMAFDRLAKADPLHI
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgacccatgtctcaatcggcggcctgaccgccggaaacgacctgccgcttctggtgatc
gccgggccttgccaactggaaagcctggaccatgcccagatgatcgccggcaccctggcc
gaagcctgcgccatggcaggggcgcaatacgtgttcaaggccagctacgacaaggccaac
cgtaccagcctcaagggcaagcgtggcctcggcatggaaaagggcctgcaggtgctgcag
gcggtcaaggccatgggcatgcccgtgttgaccgatttccacgaaccggaccaggcggcc
gaggtcgcctccgtggtggacgtgctgcaaatccctgcacttctctgccgccagaccgac
cttctgctcgccgccggccgcaccggggccgtggtgaacgtcaagaagggccagttcctc
gatccctatggcatggccaatgttgcccagaagatcgcctccaccgggaacgagcgtatc
cttcttacggaacgcggtaccacctttggctacaacggtctggtcgccgacatgcgcagc
ctgccgatcatggcccgcaccggctatcccgtggtgatggacgcgacccacgccgtcgcc
ttccccggcggcctgggtgacagttcgggcggccagcgcgaatttgcgcccgtcctcgcc
cgcgccgccgtggcgatcggcatcgccggggtcttcctcgaaacccacgaagaccccgac
cgcgccccctcggacgggccgaacatgatccacctggccgacatgccccggctgatcgaa
agcctgatggccttcgaccgcctcgccaaggccgatccgctgcacatctga
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