Neotabrizicola shimadae: JO391_05280
Help
Entry
JO391_05280 CDS
T08148
Name
(GenBank) rRNA large subunit pseudouridine synthase E
KO
K06181
23S rRNA pseudouridine2457 synthase [EC:
5.4.99.20
]
Organism
nsm
Neotabrizicola shimadae
Brite
KEGG Orthology (KO) [BR:
nsm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
nsm03009
]
JO391_05280
Enzymes [BR:
nsm01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.20 23S rRNA pseudouridine2457 synthase
JO391_05280
Ribosome biogenesis [BR:
nsm03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
JO391_05280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
DUF5818
Motif
Other DBs
NCBI-ProteinID:
QYZ70928
UniProt:
A0A8G0ZY50
LinkDB
All DBs
Position
complement(1104154..1104744)
Genome browser
AA seq
196 aa
AA seq
DB search
MPRLILLNKPYDVLCQFTDGEGRKTLADFVPVKGVYAAGRLDRDSEGLVVLTDDGRLQAR
ISDPAHKAPKTYLVQVEGTVSEDALQTLCRGVTLNDGPTRPAQARTIAEPPGLWPRVPPI
RVRKSVPDAWIELTLTEGRNRQVRRMTAAVGLPTLRLIRWSVGDWSLDGLAPGQWRDIPL
PGAPDAARPRRADRRA
NT seq
591 nt
NT seq
+upstream
nt +downstream
nt
atgccccgcctgatcctcctcaacaagccctatgacgtgctctgccagttcaccgatggc
gaggggcgcaagaccctggccgatttcgtgccggtgaagggcgtctatgccgccgggcgg
ctggaccgcgacagcgaggggttggtggtgctgaccgacgatggccgccttcaggcccgc
atcagcgaccccgcccacaaggcgcccaagacctatctcgttcaggtcgaggggacggtc
agcgaagacgccctccagactctgtgcaggggcgtgaccctgaacgacggccccacccgc
ccggcccaggcccgcaccattgccgagccgccgggtctttggccgcgtgtgccgccgatc
cgggtccgcaaatccgtgcccgatgcctggatcgaactcaccctcaccgaaggccgcaac
cggcaggtccgccgcatgaccgcggccgtaggcctgcccaccctgcgcctgatccgctgg
tcggtgggcgactggtcgctggacggcctcgcccccggccagtggcgcgacattcccctg
cccggagcccccgatgccgcaagaccccgacgcgctgatcgccgcgcttga
DBGET
integrated database retrieval system
