KEGG   Neotabrizicola shimadae: JO391_05305
Entry
JO391_05305       CDS       T08148                                 
Name
(GenBank) vitamin B12-dependent ribonucleotide reductase
  KO
K00525  ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
Organism
nsm  Neotabrizicola shimadae
Pathway
nsm00230  Purine metabolism
nsm00240  Pyrimidine metabolism
nsm01100  Metabolic pathways
nsm01232  Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:nsm00001]
 09100 Metabolism
  09104 Nucleotide metabolism
   00230 Purine metabolism
    JO391_05305
   00240 Pyrimidine metabolism
    JO391_05305
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:nsm03400]
    JO391_05305
Enzymes [BR:nsm01000]
 1. Oxidoreductases
  1.17  Acting on CH or CH2 groups
   1.17.4  With a disulfide as acceptor
    1.17.4.1  ribonucleoside-diphosphate reductase
     JO391_05305
DNA repair and recombination proteins [BR:nsm03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   Modulation of nucleotide pools
    JO391_05305
SSDB
Motif
Pfam: Ribonuc_red_lgC Ribonuc_red_2_N TSCPD TACO1_YebC_N DUF3368
Other DBs
NCBI-ProteinID: QYZ70933
UniProt: A0A8G1EE74
LinkDB
Position
1109148..1112813
AA seq 1221 aa
MKIERKLTKPETGAYGEMAFAVTTSEIRNPDGKVVFRNDSVEIPEGWSQVASDVLAQKYF
RKAGVPARLKKVREKGVPEFLWRSVPDEAALATLPEGERFVGETSARQVFDRLAGAWAYW
GWKGGYFSTEADAKAYYDEMRFMLARQMAAPNSPQWFNTGLHWAYGIDGPSQGHFYVDHA
TGKLVKSDSAYEHPQPHACFIQSVSDDLVNEGGIMDLWVREARLFKYGSGTGTNFSSLRG
EGEKLSGGGKSSGLMGFLKIGDRAAGAIKSGGTTRRAAKMVICDMDHPDIEAFINWKVIE
EQKVASLVAGSKAHEARLNDIFKAIGAWDGRAEDAVDPAKNAGLKTAIRAAKKAMIPDTY
TNRVLQYAKQGYTSIEFPTYDTDWDSEAYVTVSGQNSNNSVRVTDAFLKAVKDNADWALM
RRTDGKVSKTVKARELWDMVGHAAWACADPGIQFHDTVNAWHTCPADGPIRGSNPCSEYM
FLDDTACNLASMNLLTFFANGRFDSAAYVHASRLWTITLEISVMMAQFPSKEIAQLSYDF
RTLGLGYANIGGLLMNMGLGYDSAEGRALCGALTAIMTGIAYATSAEMAAELGAFPGYKR
NEAHMLRVIANHRMAAYGRTSGYEGVNVNPVALDAVNCPDASLIALARSAWDEALRLGEE
HGYRNAQTTVIAPTGTIGLVMDCDTTGIEPDFALVKFKKLAGGGYFKIINQSVPAALETL
GYPGHQIAEIVAHAVGHGSLAQAPGINHTALIGHGFGPAEIEKVEAALPSAFDIRFVFNQ
WTLGQDFCSGTLGIPAEKLADPTFDLLTHLGFTKAQIAAANDHVCGTMTLEGAPFLKPQH
LSVFDCANPCGKTGKRFLSVESHIHMMAAAQSFISGAISKTINMPNAASIEDVLAAYELS
HSLGIKANAIYRDGSKLSQPLASALVEDDEEAEEVLATGSAQEKAVVLAEKIVEKIIVKE
VIRTNREKLPERRKGYTQKAIVGGHKVYLRTGEYGDGRLGEIFIDMHKEGAGFRAMMNNF
AIAVSVGLQYGVPLEEFVEAFTFTRFEPAGMVQGNEAIKNATSILDYIFRELAVSYLDRT
DLAHVQPKGAAFDDLGRGDDEGKRNIAEVSDTAASKSVELLKSISSTGYLRKRLPQELVV
FNGGISGVTAMGGGSTGFSEAAVSYSATTAIATGTVSMDARTKAKMQGYEGDPCGECGNY
TLVRNGTCMKCNTCGGTSGCS
NT seq 3666 nt   +upstreamnt  +downstreamnt
atgaagatcgagcgcaagttaaccaagccggaaaccggcgcctatggcgaaatggctttc
gccgtgaccacttcggaaatccgcaatcccgacgggaaggtggtgttccgcaacgattcc
gtggagattcccgagggctggagccaggtggcctcggacgttctggcgcagaagtatttc
cgcaaggccggcgtgccggcgcggctgaagaaggtgcgcgagaagggcgtgcccgagttc
ctgtggcggtctgtccccgacgaggccgcgttggccacgctgcccgagggcgagcggttt
gtcggcgaaacctcggcgcggcaggtctttgaccggctggccggtgcctgggcctactgg
ggctggaagggcggctatttcagcaccgaggccgacgcgaaggcctattacgacgaaatg
cgcttcatgctggcgcggcagatggcggcgccgaactcgccccagtggttcaacaccggg
ctgcactgggcctatggcatcgacggcccgagccagggccatttctacgtggaccatgcc
acgggcaaactggtgaagtcggacagcgcctatgagcatccgcagccccatgcctgcttc
atccagtcggtttcggacgatctggtgaacgagggcggcatcatggacctgtgggtccgc
gaggcgcggctgttcaagtatggctcgggcaccggcaccaatttctcgtccctgcgcggc
gagggcgagaagctttcgggcgggggcaagtcctcgggcctgatggggttcctgaagatc
ggcgaccgcgcagcgggcgcgatcaagtcgggcggcaccacgcggcgcgcggcaaagatg
gtgatctgcgacatggatcaccccgatatcgaggcctttatcaactggaaggtcatcgag
gagcagaaggtcgcctcgctggtggcgggctcgaaggcgcatgaggcgcggctgaacgac
atcttcaaggcgatcggcgcctgggacgggcgggccgaagacgcggtggatccggcgaag
aacgcgggactgaaaacggcgatccgggcggcgaaaaaggccatgatcccggacacctac
acgaaccgcgtgctgcaatacgcgaagcagggctatacctcgatcgagttcccgacctat
gacacggactgggattcggaagcctatgtcaccgtgtcgggccagaattccaacaactcg
gtccgggtgacggatgccttcctgaaggcggtgaaggacaatgccgactgggcgctgatg
cggcgcaccgatggcaaggtgtcgaagaccgtgaaggcgcgggaactgtgggacatggtg
ggccatgccgcctgggcctgcgccgaccctggcatccagttccatgacacggtgaacgcc
tggcacacctgcccggcggacgggccgatccgcggatcgaacccgtgctcggaatacatg
ttcctggacgacacggcctgcaacctggcctcgatgaacctgctgacgttctttgcgaac
ggtcgtttcgattcggcggcttatgtccatgccagccggctgtggacgatcacgctggag
atcagcgtgatgatggcgcagttcccgtcgaaggaaatcgcgcagctcagctatgacttc
cgcacccttggcctgggctatgccaatatcggcggcctgttgatgaacatggggctgggc
tacgattcggcggaaggccgggcgctgtgcggcgcactgaccgcgatcatgaccggcatc
gcctatgcgacctcggccgagatggcggcagagcttggcgccttccccggctacaagcgc
aacgaagcgcatatgctgcgcgtgatcgccaaccaccgcatggcggcctatggccggacg
agcgggtatgagggcgtgaacgtgaacccggtggcgctggatgcggtgaactgcccggat
gcgagcctgatcgcgctggcgcggtcggcctgggacgaggcgctgcgcctcggcgaggag
catggctatcgcaacgcgcaaaccacggtgatcgcgcccacgggcacgatcgggctggtg
atggactgcgacaccaccggcatcgagccggatttcgcgctggtgaagttcaagaagctg
gccggcggcggctatttcaagatcatcaaccagtcggtgccggcggcgctggaaaccctg
ggctatccgggccaccagatcgccgagatcgtggcccatgcggtgggccatggctcgctg
gcgcaggcgccggggatcaaccacaccgcgctgatcggccacggcttcgggccggccgag
atcgagaaggtcgaggccgcgctgccgagtgccttcgacatccgcttcgtgttcaaccag
tggaccctggggcaggatttctgctcgggcaccctggggatcccggcggaaaagctggcg
gacccgaccttcgacctgctgacgcacctgggcttcaccaaggcgcagatcgccgcggcg
aacgaccatgtctgcgggacgatgacgctggagggcgcgcccttcctgaagccgcagcac
ctttcggtgttcgactgcgccaacccctgcggcaagaccggcaagcggttcctgtcggtg
gaaagccacatccacatgatggcggcggcgcagagcttcatctcgggcgcgatttccaag
acgatcaacatgccgaacgccgcctcgatcgaggatgtgctggcggcctatgaactgtct
cattcgcttggcatcaaggcgaacgccatctaccgcgacgggtccaagctcagccagccg
ctggcctctgcccttgtggaggacgacgaggaggccgaagaggtgctggccaccggctcg
gcgcaggagaaggccgtggtcctggccgagaagatcgtcgagaagatcatcgtcaaggaa
gtgatccgcaccaaccgcgagaagctgccggaacgccgcaagggctatacccagaaggcg
attgtcgggggccacaaggtctatctgcgcacgggcgaatacggcgacgggcgtctgggc
gagatcttcatcgacatgcacaaggaaggcgcgggcttccgggcgatgatgaacaacttc
gccatcgctgtgagcgtcggcctgcaatacggtgttccgcttgaggaattcgtcgaagcc
ttcaccttcacccgctttgagcccgcgggcatggtgcagggcaacgaggcgatcaagaat
gccacctcgatcctggattacatcttccgggaactggcggtcagctatctcgaccgcacc
gacctggcccatgtccagcccaagggcgcagctttcgacgacctgggccgcggcgacgac
gagggcaagcgcaacatcgccgaggtgagcgacaccgccgcctccaagtcggtggagctg
ctgaagtcgatctcgtccacgggctatctgcgcaagcgcctgccgcaggaactggtggtg
ttcaacggcggcatcagcggcgtgacggccatgggcggcggctcgaccggcttctcggaa
gccgcggtcagctacagcgcaacgaccgccatcgccaccggcacggtcagcatggacgcc
cgcaccaaggcgaagatgcagggctatgagggcgatccctgcggcgaatgcggcaactac
acgctggtgcgcaacggcacctgcatgaagtgcaacacctgcggcgggacgtcgggctgt
tcctga

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