KEGG   Neotabrizicola shimadae: JO391_06230
Entry
JO391_06230       CDS       T08148                                 
Symbol
choV
Name
(GenBank) choline ABC transporter ATP-binding protein
  KO
K02000  glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
Organism
nsm  Neotabrizicola shimadae
Pathway
nsm02010  ABC transporters
Brite
KEGG Orthology (KO) [BR:nsm00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    JO391_06230 (choV)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:nsm02000]
    JO391_06230 (choV)
Enzymes [BR:nsm01000]
 7. Translocases
  7.6  Catalysing the translocation of other compounds
   7.6.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.6.2.9  ABC-type quaternary amine transporter
     JO391_06230 (choV)
Transporters [BR:nsm02000]
 ABC transporters, prokaryotic type
  Mineral and organic ion transporters
   Glycine betaine/proline transporter
    JO391_06230 (choV)
SSDB
Motif
Pfam: ABC_tran AAA_21 CBS AAA_22 SMC_N AAA_16 ABC_ATPase AAA_29 RsgA_GTPase APS_kinase AAA_33 PEPCK_ATP nSTAND1
Other DBs
NCBI-ProteinID: QYZ71104
UniProt: A0A8G0ZV96
LinkDB
Position
complement(1295154..1296182)
AA seq 342 aa
MTRNAVEFDKVSIVFGERPLEALPHMDKGLSRAEVQERCGQVLGVHDCSLSVGEGEILVL
MGLSGSGKSTLLRGVNALNPVVRGEVRVLDGDRMASVTKSDPATLRRLRATKIAMVFQQF
GLLPWRTVRENVGLGLELAGQSPAERKPKVDEQLALVNLTQWADRRVGELSGGMQQRVGL
ARAFATQAPILLMDEPFSALDPLIRARLQDELLELQARLKRTIVFVSHDLDEAFKIGNRI
ALMEGGRIVQCGTAREIIANPVSDYVADFVAHMNPLGVLTARDVMDKGETSALLAVDVET
PVRQIMEAMRDGVTEMAVTEAGTRVGVVRPGHLMGRLVNPRG
NT seq 1029 nt   +upstreamnt  +downstreamnt
atgactcgcaacgcggtcgaattcgacaaggtctccatcgtcttcggcgaacgcccgctg
gaagccctgccccacatggacaagggcctcagccgcgccgaagtgcaggaacgctgcggc
caggtcctgggcgtgcacgactgttcgctttcggtcggcgagggcgagatcctcgtactg
atgggcctgtccggctcgggcaagtccacgctcctgcgtggggtgaacgctctgaacccc
gtggtgcggggcgaagtgcgggtgcttgacggcgaccgcatggcctcggtcacaaaatcc
gatcccgccacgctgcgccgcctgcgcgcgaccaagatcgccatggtgttccagcagttc
ggcctcctgccctggcgcaccgtgcgcgagaacgtgggcctcggcctcgaactcgccggc
cagtcgcccgccgaacgcaagcccaaggtcgatgagcaactcgcccttgtgaacctcacg
caatgggccgaccgccgcgtgggcgagctttcgggcggcatgcagcagcgcgttggcctt
gcccgcgccttcgccacccaggcgccgatcctgttgatggacgaacccttctcggcgctg
gacccgctgatccgcgcccgcctgcaagacgagttgctggagcttcaggcccgcttgaag
cgcaccatcgtcttcgtctcccacgacctcgacgaggccttcaagatcggcaaccgcatt
gcgctgatggaaggcgggcgcatcgtgcaatgcggcaccgcgcgcgagatcatcgccaac
ccggtcagcgactacgtcgccgatttcgtggcccacatgaacccgcttggcgtgctgacc
gcgcgcgacgtgatggacaagggcgagacttcggccctgctggcggtggacgtggaaacc
ccggtcaggcaaatcatggaagccatgcgcgacggcgtcaccgaaatggcggttacagag
gccggcactcgcgtcggcgtggtccggcccggccacctgatgggccggctcgtcaacccg
cgcggctag

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