Neotabrizicola shimadae: JO391_06790
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Entry
JO391_06790 CDS
T08148
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
nsm
Neotabrizicola shimadae
Brite
KEGG Orthology (KO) [BR:
nsm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nsm03400
]
JO391_06790
Enzymes [BR:
nsm01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
JO391_06790
DNA repair and recombination proteins [BR:
nsm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
JO391_06790
Prokaryotic type
JO391_06790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
QYZ71205
UniProt:
A0A8G0ZYH2
LinkDB
All DBs
Position
complement(1410493..1412013)
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AA seq
506 aa
AA seq
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MNVLVWFKRDLRAADHPALAHAAGLGRVLPVYVVEPELWRQPDASARHWGFVAESLAELR
RDLAALGAPLVVRTGDAVEVLAELAARHGVTRMVSHQETGTQWSFARDRRVAAWARQAGI
AWEELPQAGVRRGARDRAGWAGFRDGFMAGAVLAPPALSAVPGVEPGMIPSAAALRLAAD
RCPHRQAGGRARGLALMDSFLASRGEGYLAAMSAPGTGERSCSRLSPHLAWGTLSAREVD
QAARARAEERPGGTWGGSLAGFRNRLAWRDHFLQRLEDVPDLEARAMSAAAEHLRPREPD
AARLEAWAGGETGLPYVDACLRYLAATGWLNFRARAMLMAVASYHLWLDWRATAPVLARA
FTDYEPGVHWSQAQMQSGVTGINVPRIYNPVKQGQDHDPTGAFTRAWVPELAAVPDIWLQ
EPWKWPGAKGLLGRRYPEPVVDPEAAARAARAAMGVLRRAPEVREEALVIEARHASPGAT
DPRFRRDALSGRRARAVEPGQLSFGF
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atgaatgttctcgtctggttcaagcgtgatctgcgcgccgccgaccaccctgccctggcc
catgccgccgggctggggcgggtcctgcccgtctatgtggtggagccggagctgtggcgc
cagcccgatgcctcggcccggcactgggggttcgtggccgaaagcctggccgagctgcgt
cgcgacctggcggcgcttggggcgcccctggtggtgcggacgggcgatgcggtggaggtg
ctggcggaactggcggcgcggcatggcgtgacgcggatggtcagccaccaggagaccggc
acgcaatggagctttgcgcgtgaccggcgggtggcggcctgggcgcggcaggcggggatt
gcctgggaggaactgccgcaggccggtgtgcggcggggtgcgcgggaccgggcgggatgg
gccgggtttcgcgacgggttcatggcgggggcggtgttggcgccccctgccctgtcggcg
gtgccgggggtggagccggggatgatcccttccgccgcggcgctgaggctggcggcggac
cgctgcccgcaccggcaggcgggcgggcgggcgcgggggctggcgctgatggacagcttc
cttgccagccggggcgaaggctatctggcagcgatgtcggcgccgggcacgggcgagcgg
tcctgttcgcgcctgtcgccgcatctggcctggggcacgctgtcagcgcgcgaggtggac
caggcggcgcgggctcgggccgaggaacggccgggcgggacctggggcggatcgctggcc
gggttccgcaaccggctggcctggcgcgaccatttcctgcagcggctggaggatgtgccg
gatctggaggcgcgggccatgtctgccgcggcggaacacttgcgcccgcgcgagcccgat
gcggcgcggctggaggcctgggcggggggcgagacggggttgccctatgtggacgcctgc
ctccgctatctggcggcgacgggctggctgaactttcgggcgcgggcgatgctgatggcg
gtggcctcctatcacctgtggctggactggcgggcgacggcgccggtgctggcgcgggcc
ttcaccgattacgagccgggcgtccactggtcgcaggcgcagatgcagtcgggggtgacg
gggatcaacgtgccgcgcatctacaacccggtgaagcagggtcaggaccacgacccgacc
ggcgccttcacccgggcatgggtgccggaactggcggcggtgccggacatctggctgcag
gagccgtggaaatggccgggggcgaaggggcttctggggcggcgctatcccgagccggtg
gtggacccggaggccgcggcacgcgcggcgcgggcggcgatgggggtgctgaggcgcgcg
ccggaggtgcgggaggaggcgctggtgatcgaggcgcggcacgccagccccggcgcgacc
gatccgcggttccgccgcgatgcgctgagcgggcggcgggcgcgggcggtggagccggga
cagctgagtttcgggttctga
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