Neotabrizicola shimadae: JO391_06990
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Entry
JO391_06990 CDS
T08148
Name
(GenBank) L,D-transpeptidase family protein
KO
K21470
L,D-transpeptidase YcbB
Organism
nsm
Neotabrizicola shimadae
Brite
KEGG Orthology (KO) [BR:
nsm00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
nsm01002
]
JO391_06990
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
nsm01011
]
JO391_06990
Peptidases and inhibitors [BR:
nsm01002
]
Cysteine peptidases
Family C82
JO391_06990
Peptidoglycan biosynthesis and degradation proteins [BR:
nsm01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
JO391_06990
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Scaffold
YkuD
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
QYZ71244
UniProt:
A0A8G0ZZJ4
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Position
complement(1442948..1444558)
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AA seq
536 aa
AA seq
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MPPRQRRSLPYNAIAAAVLAVVLSAEAGRAQDMPSPFVQSVAAAAAEDETVSAFYAARDY
RTLWTGPQDAERRSLVLSAFATAADHGLPVSRYDAATLAALFASAQTEGDRGRLEVAMTR
AYLAFAHDLQSGALVPKKVDGGILREVTVVDPAVNLAAVESPDFAAYLRDLPPDAPEYAR
LMAARFELQQVVGADGWGAAVLSGGLGQGDRGAAVVALRDRLGAMGYLGRTATAIYDRDI
AAAVSQFQIDHGLPATGKADADTLAEINESPESRLQSVTVALERLRWMGDAPRGDRHIWV
NQPDFTARIVDHGKVTFQTRAVIGKDSADQRSPEFSDEMEYMVVNPSWGVPRSITVKEYL
PLLQRNPNAVGHLQVVDSRGRVIPRGSVNFAAYSARSFPFGLRQPPSDGNALGKVKFMFP
NPYNIYLHDTPSKSLFEKQVRAFSHGCIRLGEPFDFAYTLLAPQTDDPQGSFEESLNTGR
ETVVKFDTHIPVHLVYFTAWPTPKGRMTYRNDVYGRDQRIWDALMAAGLEPAGASG
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atgccgccccgtcagcgacgcagccttccgtacaacgcgatcgcagcggccgttcttgca
gtggtcctttcggcagaggctggtcgggcacaggacatgccctcgcccttcgtgcagtca
gtggctgcggccgcggcggaggacgagaccgtgtccgccttctatgccgcgcgggactac
cggaccctgtggaccggaccgcaagatgccgagcgccggtcgcttgtactttcggccttt
gccacggcggccgaccatggacttcccgtctcgcgctatgacgccgcaaccttggccgcg
ctctttgcaagcgcacagaccgaaggagaccgcgggcggctggaagtggcgatgacgcgg
gcctacctggccttcgcgcatgacctgcaaagcggcgcgctggtgccgaagaaggtcgat
ggcggcatcctgcgcgaggtcacggtcgtggatccggcggtgaaccttgctgccgtcgaa
agccccgactttgccgcctatctgcgggaccttccccccgatgcgccagagtatgcgcgc
ctcatggcggcgcggttcgaactgcaacaggtcgttggcgctgacggttggggcgccgcg
gtcttgtccggcggactggggcagggcgacaggggtgcggcggttgtggccctgcgcgac
cgcctgggcgcgatgggttacctgggacggaccgcaaccgctatctatgatcgtgacatc
gctgccgctgtgtcgcagttccagatcgatcacgggcttccggcgaccggaaaggccgat
gcggatactctggccgagatcaatgaaagccccgaatcccgccttcagtcggtgacggtt
gcgctggaaagactgcgctggatgggcgatgcaccgcgcggcgaccggcatatctgggtg
aatcaaccggatttcaccgcccgcatcgtggatcatggcaaggtcacgtttcagacacgc
gccgtgatcggcaaggattcggccgaccagcgcagccccgagttctctgacgagatggag
tacatggtggtgaacccctcgtggggtgtgccgcggtccatcaccgtgaaagagtacctg
ccgcttctgcaacgtaacccgaacgccgtcggtcatctgcaggtggtggacagtcgcggt
cgggtgatcccgcgtggaagcgtgaactttgccgcctattctgcccgcagctttcccttt
ggcctacgccagcccccctctgacggcaacgcgcttggcaaagtaaagttcatgtttccg
aacccttacaacatctacctgcacgacacgccttccaaatccctgtttgaaaagcaggtg
cgtgccttcagccacggttgcatccgcctgggcgagcccttcgactttgcctacaccctt
ctcgccccccagaccgacgatccgcagggcagcttcgaggaaagcctgaacaccgggcgg
gagacggtggtgaagttcgacacgcatattcccgtgcatctggtctacttcaccgcctgg
cccacgccgaagggacgcatgacctatcggaatgacgtgtatggtcgcgaccaacgaatc
tgggatgcactgatggccgcagggctggaaccggccggcgcctcgggttaa
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