KEGG   Neotabrizicola shimadae: JO391_07065
Entry
JO391_07065       CDS       T08148                                 
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
  KO
K13599  two-component system, NtrC family, nitrogen regulation response regulator NtrX
Organism
nsm  Neotabrizicola shimadae
Pathway
nsm02020  Two-component system
Brite
KEGG Orthology (KO) [BR:nsm00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    JO391_07065
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:nsm02022]
    JO391_07065
Two-component system [BR:nsm02022]
 NtrC family
  NtrY-NtrX (nitrogen regulation)
   JO391_07065
SSDB
Motif
Pfam: Sigma54_activat Response_reg Sigma54_activ_2 HTH_8 AAA_5 AAA_2 Mg_chelatase MCM cREC_REC AAA_16 AAA M-inducer_phosp AAA_19 AAA_7 OKR_DC_1_N FleQ
Other DBs
NCBI-ProteinID: QYZ71258
UniProt: A0A8G0ZYM0
LinkDB
Position
complement(1458606..1460015)
AA seq 469 aa
MSSILIVDDEKDIRDLIGDILSDEGYAVRLAGNSDDCIAEINTEPPALMILDIWLKDSRM
DGIDILKKVKRDNPDIPVVIISGHGNIEIAVAAIKQGAYDFIEKPFNIDQLMVVVGRAME
TSRLRRENVELRRRDVTAAEMLGSSPGFKALKSQLEKVTKSNARVMLTGPAGSGKEMAAR
FIHAHSNRAAAPFVTVTSATIEPERMEEVLFGRETADRGVEKGLLEQAHGGVIYFDEVAD
MPVGTQSKILRVLTEQQFTRAGGADKVRVDLRVISSTTRDLRAEIGLGRFRQELYDRLNV
VPIAVPSLEERREDIPELTRHFIDHFHRTQGLPQRSLTTEAEAMLQTMSWPGNVRQLRNV
IERILILGDGTGSIEARELPGQEPTGEGGGRLVLGGAMATMPLREAREVFEREYLLTQIN
RFGGNISRTANFVGMERSALHRKLKSLGVVSTGKGNGGAAEIEAEEEAD
NT seq 1410 nt   +upstreamnt  +downstreamnt
atgagcagcatcctgatcgtggatgacgagaaagatatccgtgacctgatcggcgacatc
ctgtcggatgaaggctatgccgtccggctggccggcaattccgacgattgcatcgccgaa
atcaacacggaaccaccggcgctgatgatcctcgacatctggctgaaagacagccggatg
gacgggatcgacatcctgaaaaaggtcaagcgcgacaatcccgacatccccgtcgtcatc
atctcgggtcacggcaacatcgaaatcgcggtcgccgccatcaagcagggcgcctacgac
ttcatcgagaagccgttcaacatcgaccagctcatggtcgtggtcggccgcgccatggaa
acctcgcggctgcggcgcgagaatgtcgaactgcgccgccgcgatgtgaccgcggccgag
atgctgggctccagccccggcttcaaggcgctgaaatcccagctggaaaaggtcacgaag
tcaaacgcccgcgtcatgctgacgggccccgccggctcgggcaaggaaatggccgcgcgc
ttcatccacgcccattccaaccgcgccgccgcacccttcgtcaccgtgacgtcggccacc
atcgaacccgagcgcatggaagaggtgctcttcggccgcgaaaccgcggatcgcggggta
gagaagggcttgctggaacaggcccacggcggggtgatctacttcgacgaggtggccgac
atgcccgtcggcacccagtccaagatcctgcgcgtgctcaccgaacaacagttcacccgg
gccggcggcgccgacaaggtccgcgttgacctgcgcgtcatctcctccaccacccgcgac
ctacgcgccgaaatcggcctcggccgcttccgccaggaactctacgaccggctgaacgtc
gtccccatcgccgtgccctcgctggaagaacgccgcgaggacatccctgaactcacccgc
catttcatcgaccacttccaccgcacccagggcctgccgcagcgcagcctcaccaccgag
gccgaggccatgctgcaaaccatgtcctggcctggcaacgtccgccagctgcgcaacgtg
atcgagcgtatcctgatcctgggcgacggcaccggttccatcgaggcgcgcgaactgccg
gggcaggaacccaccggcgaaggcggcggccggctcgtcctgggcggcgccatggccacc
atgccgctgcgcgaggcgcgcgaggtgttcgagcgcgaatatctcctgacccagatcaac
cgcttcggcggcaacatcagccgaaccgccaacttcgtcggcatggaacgctcggcgctc
caccgcaagctcaagtcgcttggcgtggtttccaccggcaagggcaacggcggcgcggcg
gagatcgaggccgaggaagaagccgactga

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